Hb_015175_010

Information

Type -
Description -
Location Contig15175: 5531-8785
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP26819.1
description hypothetical protein JCGZ_17977 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K4T3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17977 PE=4 SV=1
Gene Ontology
ID GO:0008080
description upf0202 protein at1g10490-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015175_010 0.0 - - hypothetical protein JCGZ_17977 [Jatropha curcas]
2 Hb_001277_200 0.2067915231 - - cation-transporting atpase plant, putative [Ricinus communis]
3 Hb_000019_140 0.2413529838 - - Light-regulated protein precursor, putative [Ricinus communis]
4 Hb_156850_080 0.2731930152 - - PREDICTED: uncharacterized protein LOC105635247 [Jatropha curcas]
5 Hb_005276_170 0.2746826589 - - PREDICTED: mitochondrial Rho GTPase 2 isoform X1 [Jatropha curcas]
6 Hb_001268_060 0.2776570512 - - conserved hypothetical protein [Ricinus communis]
7 Hb_004787_100 0.2807519574 - - PREDICTED: transcription factor bHLH47 [Jatropha curcas]
8 Hb_020400_040 0.2832570322 - - PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Jatropha curcas]
9 Hb_006538_030 0.2873077294 - - PREDICTED: uncharacterized protein LOC105642039 [Jatropha curcas]
10 Hb_007218_140 0.2930879307 - - hypothetical protein JCGZ_24847 [Jatropha curcas]
11 Hb_065500_040 0.2957394998 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000009_310 0.2966687371 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_009683_050 0.2975309875 - - wall-associated kinase, putative [Ricinus communis]
14 Hb_000167_020 0.2993080537 - - -
15 Hb_001341_110 0.3131686224 - - PREDICTED: vicilin-like antimicrobial peptides 2-2 [Jatropha curcas]
16 Hb_180486_010 0.3139217315 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
17 Hb_002205_010 0.3145719939 - - hypothetical protein JCGZ_03337 [Jatropha curcas]
18 Hb_008246_090 0.3152049583 - - -
19 Hb_000069_730 0.3166782055 transcription factor TF Family: bZIP PREDICTED: common plant regulatory factor 1-like isoform X1 [Jatropha curcas]
20 Hb_004324_290 0.3180859468 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor CRF4 [Jatropha curcas]

Gene co-expression network

sample Hb_015175_010 Hb_015175_010 Hb_001277_200 Hb_001277_200 Hb_015175_010--Hb_001277_200 Hb_000019_140 Hb_000019_140 Hb_015175_010--Hb_000019_140 Hb_156850_080 Hb_156850_080 Hb_015175_010--Hb_156850_080 Hb_005276_170 Hb_005276_170 Hb_015175_010--Hb_005276_170 Hb_001268_060 Hb_001268_060 Hb_015175_010--Hb_001268_060 Hb_004787_100 Hb_004787_100 Hb_015175_010--Hb_004787_100 Hb_001277_200--Hb_001268_060 Hb_000086_610 Hb_000086_610 Hb_001277_200--Hb_000086_610 Hb_002982_030 Hb_002982_030 Hb_001277_200--Hb_002982_030 Hb_002119_030 Hb_002119_030 Hb_001277_200--Hb_002119_030 Hb_171974_010 Hb_171974_010 Hb_001277_200--Hb_171974_010 Hb_000071_140 Hb_000071_140 Hb_000019_140--Hb_000071_140 Hb_000069_730 Hb_000069_730 Hb_000019_140--Hb_000069_730 Hb_015934_030 Hb_015934_030 Hb_000019_140--Hb_015934_030 Hb_001489_120 Hb_001489_120 Hb_000019_140--Hb_001489_120 Hb_006111_030 Hb_006111_030 Hb_000019_140--Hb_006111_030 Hb_000221_060 Hb_000221_060 Hb_000019_140--Hb_000221_060 Hb_020400_040 Hb_020400_040 Hb_156850_080--Hb_020400_040 Hb_002205_010 Hb_002205_010 Hb_156850_080--Hb_002205_010 Hb_005496_070 Hb_005496_070 Hb_156850_080--Hb_005496_070 Hb_002110_240 Hb_002110_240 Hb_156850_080--Hb_002110_240 Hb_001472_130 Hb_001472_130 Hb_156850_080--Hb_001472_130 Hb_000152_860 Hb_000152_860 Hb_156850_080--Hb_000152_860 Hb_005276_170--Hb_002205_010 Hb_005488_120 Hb_005488_120 Hb_005276_170--Hb_005488_120 Hb_006846_020 Hb_006846_020 Hb_005276_170--Hb_006846_020 Hb_005288_020 Hb_005288_020 Hb_005276_170--Hb_005288_020 Hb_000009_310 Hb_000009_310 Hb_005276_170--Hb_000009_310 Hb_005400_040 Hb_005400_040 Hb_005276_170--Hb_005400_040 Hb_000836_160 Hb_000836_160 Hb_001268_060--Hb_000836_160 Hb_082225_010 Hb_082225_010 Hb_001268_060--Hb_082225_010 Hb_006043_020 Hb_006043_020 Hb_001268_060--Hb_006043_020 Hb_078171_010 Hb_078171_010 Hb_001268_060--Hb_078171_010 Hb_001268_060--Hb_000086_610 Hb_031530_010 Hb_031530_010 Hb_001268_060--Hb_031530_010 Hb_005568_060 Hb_005568_060 Hb_004787_100--Hb_005568_060 Hb_002217_270 Hb_002217_270 Hb_004787_100--Hb_002217_270 Hb_004324_290 Hb_004324_290 Hb_004787_100--Hb_004324_290 Hb_000532_030 Hb_000532_030 Hb_004787_100--Hb_000532_030 Hb_000103_400 Hb_000103_400 Hb_004787_100--Hb_000103_400 Hb_006538_030 Hb_006538_030 Hb_004787_100--Hb_006538_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0172032 0.431759 0.17262 0.0130131 0 0.0358603
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0785561 0.092692 0 0.012371 0

CAGE analysis