Hb_015183_050

Information

Type -
Description -
Location Contig15183: 28700-30480
Sequence    

Annotation

kegg
ID rcu:RCOM_0534670
description Mitochondrial chaperone BCS1, putative
nr
ID KDP25709.1
description hypothetical protein JCGZ_24010 [Jatropha curcas]
swissprot
ID Q9P6Q3
description Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC644.07 PE=2 SV=1
trembl
ID A0A067K1S4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24010 PE=3 SV=1
Gene Ontology
ID GO:0005524
description mitochondrial chaperone

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015183_050 0.0 - - hypothetical protein JCGZ_24010 [Jatropha curcas]
2 Hb_081065_010 0.0061726107 - - hypothetical protein PHAVU_001G084100g, partial [Phaseolus vulgaris]
3 Hb_004961_010 0.009875135 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
4 Hb_008289_020 0.0108497612 - - PREDICTED: uncharacterized protein LOC105119066 [Populus euphratica]
5 Hb_021485_010 0.011383165 - - Integrase-type DNA-binding superfamily protein, putative [Theobroma cacao]
6 Hb_005366_030 0.0202100044 - - hypothetical protein JCGZ_01308 [Jatropha curcas]
7 Hb_019135_030 0.0218440918 - - putative mitogen-activated protein kinase 1 [Populus trichocarpa]
8 Hb_012753_100 0.0218713273 - - conserved hypothetical protein [Ricinus communis]
9 Hb_081287_010 0.0233726195 - - PREDICTED: alpha-dioxygenase 2 [Jatropha curcas]
10 Hb_110587_010 0.0264187128 - - unnamed protein product [Coffea canephora]
11 Hb_135513_010 0.0299280273 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
12 Hb_085910_010 0.033740084 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
13 Hb_000172_020 0.0400382781 - - PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Vitis vinifera]
14 Hb_005096_020 0.0428518425 - - PREDICTED: DIS3-like exonuclease 2-like isoform X1 [Citrus sinensis]
15 Hb_006856_060 0.0520125302 - - PREDICTED: E3 ubiquitin-protein ligase UPL5 [Jatropha curcas]
16 Hb_126916_010 0.0551751337 - - PREDICTED: putative receptor-like protein kinase At3g47110, partial [Jatropha curcas]
17 Hb_000302_050 0.0557950495 - - -
18 Hb_011045_020 0.0569322824 - - hypothetical protein CICLE_v100140161mg, partial [Citrus clementina]
19 Hb_000770_020 0.0580539161 - - hypothetical protein POPTR_0001s39195g [Populus trichocarpa]
20 Hb_010028_010 0.0653086739 - - serine/threonine-protein kinase bri1, putative [Ricinus communis]

Gene co-expression network

sample Hb_015183_050 Hb_015183_050 Hb_081065_010 Hb_081065_010 Hb_015183_050--Hb_081065_010 Hb_004961_010 Hb_004961_010 Hb_015183_050--Hb_004961_010 Hb_008289_020 Hb_008289_020 Hb_015183_050--Hb_008289_020 Hb_021485_010 Hb_021485_010 Hb_015183_050--Hb_021485_010 Hb_005366_030 Hb_005366_030 Hb_015183_050--Hb_005366_030 Hb_019135_030 Hb_019135_030 Hb_015183_050--Hb_019135_030 Hb_081065_010--Hb_005366_030 Hb_081065_010--Hb_019135_030 Hb_081065_010--Hb_004961_010 Hb_081065_010--Hb_008289_020 Hb_081287_010 Hb_081287_010 Hb_081065_010--Hb_081287_010 Hb_004961_010--Hb_008289_020 Hb_004961_010--Hb_021485_010 Hb_012753_100 Hb_012753_100 Hb_004961_010--Hb_012753_100 Hb_085910_010 Hb_085910_010 Hb_004961_010--Hb_085910_010 Hb_008289_020--Hb_021485_010 Hb_008289_020--Hb_012753_100 Hb_008289_020--Hb_085910_010 Hb_021485_010--Hb_012753_100 Hb_021485_010--Hb_081065_010 Hb_021485_010--Hb_085910_010 Hb_005366_030--Hb_019135_030 Hb_005366_030--Hb_081287_010 Hb_110587_010 Hb_110587_010 Hb_005366_030--Hb_110587_010 Hb_135513_010 Hb_135513_010 Hb_005366_030--Hb_135513_010 Hb_000172_020 Hb_000172_020 Hb_005366_030--Hb_000172_020 Hb_019135_030--Hb_081287_010 Hb_019135_030--Hb_110587_010 Hb_019135_030--Hb_135513_010 Hb_019135_030--Hb_000172_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.101855 0 0.0654528 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis