Hb_015746_010

Information

Type -
Description -
Location Contig15746: 20546-32406
Sequence    

Annotation

kegg
ID tcc:TCM_002199
description Myzus persicae-induced lipase 1
nr
ID XP_012080658.1
description PREDICTED: triacylglycerol lipase 2-like [Jatropha curcas]
swissprot
ID Q67ZU1
description Triacylglycerol lipase 2 OS=Arabidopsis thaliana GN=LIP2 PE=2 SV=1
trembl
ID A0A067KG56
description Lipase OS=Jatropha curcas GN=JCGZ_13762 PE=3 SV=1
Gene Ontology
ID GO:0016788
description triacylglycerol lipase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13731: 21433-23073 , PASA_asmbl_13733: 23078-23490 , PASA_asmbl_13734: 24481-24815 , PASA_asmbl_13736: 27608-32350
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015746_010 0.0 - - PREDICTED: triacylglycerol lipase 2-like [Jatropha curcas]
2 Hb_002043_190 0.0545508871 - - rwd domain-containing protein, putative [Ricinus communis]
3 Hb_000327_120 0.0627329644 - - FGFR1 oncogene partner, putative [Ricinus communis]
4 Hb_004048_070 0.0657190976 - - PREDICTED: anaphase-promoting complex subunit 6 [Jatropha curcas]
5 Hb_000853_170 0.0673036854 - - PREDICTED: programmed cell death protein 2 isoform X3 [Populus euphratica]
6 Hb_001571_040 0.0699333992 - - PREDICTED: uncharacterized protein LOC105643972 [Jatropha curcas]
7 Hb_000061_370 0.0714845317 - - PREDICTED: zinc finger RNA-binding protein [Vitis vinifera]
8 Hb_011689_080 0.0716763522 - - PREDICTED: uncharacterized protein LOC105631867 [Jatropha curcas]
9 Hb_066182_010 0.0727101657 - - PREDICTED: guanine nucleotide-binding protein subunit beta-like protein [Jatropha curcas]
10 Hb_007218_080 0.0732981521 - - PREDICTED: uncharacterized protein LOC105631523 [Jatropha curcas]
11 Hb_000926_280 0.0753642752 - - ubiquitin-activating enzyme E1, putative [Ricinus communis]
12 Hb_001377_290 0.0761745558 - - PREDICTED: cyclic pyranopterin monophosphate synthase accessory protein, mitochondrial [Jatropha curcas]
13 Hb_004491_010 0.0766009298 - - 60S ribosomal protein L51, putative [Ricinus communis]
14 Hb_004310_130 0.0780183351 - - PREDICTED: uncharacterized protein LOC105643225 [Jatropha curcas]
15 Hb_003392_040 0.0784070292 - - PREDICTED: D-aminoacyl-tRNA deacylase [Jatropha curcas]
16 Hb_001604_010 0.0786847294 - - 14-3-3 protein, putative [Ricinus communis]
17 Hb_001199_020 0.0791412621 - - hypothetical protein JCGZ_25565 [Jatropha curcas]
18 Hb_001404_100 0.0793926509 - - PREDICTED: eukaryotic translation initiation factor 3 subunit K [Gossypium raimondii]
19 Hb_001635_170 0.0802687978 - - hypothetical protein JCGZ_24811 [Jatropha curcas]
20 Hb_000853_420 0.0803466521 - - PREDICTED: phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_015746_010 Hb_015746_010 Hb_002043_190 Hb_002043_190 Hb_015746_010--Hb_002043_190 Hb_000327_120 Hb_000327_120 Hb_015746_010--Hb_000327_120 Hb_004048_070 Hb_004048_070 Hb_015746_010--Hb_004048_070 Hb_000853_170 Hb_000853_170 Hb_015746_010--Hb_000853_170 Hb_001571_040 Hb_001571_040 Hb_015746_010--Hb_001571_040 Hb_000061_370 Hb_000061_370 Hb_015746_010--Hb_000061_370 Hb_005993_040 Hb_005993_040 Hb_002043_190--Hb_005993_040 Hb_002081_130 Hb_002081_130 Hb_002043_190--Hb_002081_130 Hb_003126_050 Hb_003126_050 Hb_002043_190--Hb_003126_050 Hb_002233_150 Hb_002233_150 Hb_002043_190--Hb_002233_150 Hb_000041_270 Hb_000041_270 Hb_002043_190--Hb_000041_270 Hb_002685_140 Hb_002685_140 Hb_000327_120--Hb_002685_140 Hb_007951_060 Hb_007951_060 Hb_000327_120--Hb_007951_060 Hb_001635_170 Hb_001635_170 Hb_000327_120--Hb_001635_170 Hb_054865_100 Hb_054865_100 Hb_000327_120--Hb_054865_100 Hb_001595_030 Hb_001595_030 Hb_000327_120--Hb_001595_030 Hb_006185_050 Hb_006185_050 Hb_000327_120--Hb_006185_050 Hb_032717_080 Hb_032717_080 Hb_004048_070--Hb_032717_080 Hb_004970_110 Hb_004970_110 Hb_004048_070--Hb_004970_110 Hb_007254_040 Hb_007254_040 Hb_004048_070--Hb_007254_040 Hb_001135_050 Hb_001135_050 Hb_004048_070--Hb_001135_050 Hb_005539_030 Hb_005539_030 Hb_004048_070--Hb_005539_030 Hb_000853_420 Hb_000853_420 Hb_000853_170--Hb_000853_420 Hb_000109_090 Hb_000109_090 Hb_000853_170--Hb_000109_090 Hb_005276_210 Hb_005276_210 Hb_000853_170--Hb_005276_210 Hb_001006_140 Hb_001006_140 Hb_000853_170--Hb_001006_140 Hb_004577_020 Hb_004577_020 Hb_000853_170--Hb_004577_020 Hb_000300_060 Hb_000300_060 Hb_001571_040--Hb_000300_060 Hb_001790_020 Hb_001790_020 Hb_001571_040--Hb_001790_020 Hb_000032_570 Hb_000032_570 Hb_001571_040--Hb_000032_570 Hb_006332_020 Hb_006332_020 Hb_001571_040--Hb_006332_020 Hb_066182_010 Hb_066182_010 Hb_001571_040--Hb_066182_010 Hb_012634_010 Hb_012634_010 Hb_001571_040--Hb_012634_010 Hb_001677_210 Hb_001677_210 Hb_000061_370--Hb_001677_210 Hb_000061_370--Hb_002043_190 Hb_001404_100 Hb_001404_100 Hb_000061_370--Hb_001404_100 Hb_000061_370--Hb_000327_120 Hb_006502_070 Hb_006502_070 Hb_000061_370--Hb_006502_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.1661 5.62796 5.91796 5.79102 13.2059 11.5127
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.9812 12.1994 10.591 9.654 4.07064

CAGE analysis