Hb_015807_050

Information

Type -
Description -
Location Contig15807: 45420-56294
Sequence    

Annotation

kegg
ID rcu:RCOM_0182520
description hypothetical protein
nr
ID XP_012070729.1
description PREDICTED: uncharacterized protein LOC105632878 [Jatropha curcas]
swissprot
ID Q6BDS2
description UHRF1-binding protein 1 OS=Homo sapiens GN=UHRF1BP1 PE=1 SV=1
trembl
ID A0A067KSD1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00804 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13878: 45491-50247 , PASA_asmbl_13881: 52999-56022 , PASA_asmbl_13882: 55795-56089
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015807_050 0.0 - - PREDICTED: uncharacterized protein LOC105632878 [Jatropha curcas]
2 Hb_000313_220 0.0460583489 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
3 Hb_000976_140 0.0480121243 - - PREDICTED: uncharacterized protein LOC105646208 isoform X1 [Jatropha curcas]
4 Hb_109980_010 0.0492952172 - - PREDICTED: uncharacterized protein LOC105647182 isoform X1 [Jatropha curcas]
5 Hb_000035_470 0.0533261001 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
6 Hb_002849_130 0.0544217542 - - PREDICTED: RAB6A-GEF complex partner protein 1-like [Jatropha curcas]
7 Hb_000258_070 0.0552153577 - - PREDICTED: uncharacterized protein LOC105649104 [Jatropha curcas]
8 Hb_006483_110 0.0573255095 - - PREDICTED: RNA-binding protein Musashi homolog 1 [Jatropha curcas]
9 Hb_000170_090 0.0586422712 - - PREDICTED: UDP-sugar pyrophosphorylase [Jatropha curcas]
10 Hb_005730_040 0.0601998955 - - hypothetical protein PRUPE_ppa004338mg [Prunus persica]
11 Hb_003861_050 0.0609701864 - - PREDICTED: uncharacterized protein LOC105650779 [Jatropha curcas]
12 Hb_000214_050 0.061603925 - - PREDICTED: protein IQ-DOMAIN 1 isoform X1 [Jatropha curcas]
13 Hb_001377_310 0.0616676046 transcription factor TF Family: Coactivator p15 PREDICTED: uncharacterized protein LOC105642839 [Jatropha curcas]
14 Hb_002263_020 0.0620712493 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 11-like [Jatropha curcas]
15 Hb_005867_070 0.0621537468 - - DNA binding protein, putative [Ricinus communis]
16 Hb_003517_040 0.0629175451 - - PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic [Jatropha curcas]
17 Hb_001518_080 0.0631834115 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105646545 [Jatropha curcas]
18 Hb_013399_020 0.0646118743 - - PREDICTED: developmentally-regulated G-protein 2 [Jatropha curcas]
19 Hb_000347_430 0.0648607631 - - PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-A [Jatropha curcas]
20 Hb_028960_020 0.0661050486 - - PREDICTED: uncharacterized protein LOC105646163 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_015807_050 Hb_015807_050 Hb_000313_220 Hb_000313_220 Hb_015807_050--Hb_000313_220 Hb_000976_140 Hb_000976_140 Hb_015807_050--Hb_000976_140 Hb_109980_010 Hb_109980_010 Hb_015807_050--Hb_109980_010 Hb_000035_470 Hb_000035_470 Hb_015807_050--Hb_000035_470 Hb_002849_130 Hb_002849_130 Hb_015807_050--Hb_002849_130 Hb_000258_070 Hb_000258_070 Hb_015807_050--Hb_000258_070 Hb_000313_220--Hb_002849_130 Hb_000313_220--Hb_000976_140 Hb_001959_110 Hb_001959_110 Hb_000313_220--Hb_001959_110 Hb_004452_110 Hb_004452_110 Hb_000313_220--Hb_004452_110 Hb_005730_040 Hb_005730_040 Hb_000313_220--Hb_005730_040 Hb_000976_140--Hb_005730_040 Hb_000976_140--Hb_002849_130 Hb_001922_150 Hb_001922_150 Hb_000976_140--Hb_001922_150 Hb_000170_090 Hb_000170_090 Hb_000976_140--Hb_000170_090 Hb_006483_110 Hb_006483_110 Hb_109980_010--Hb_006483_110 Hb_006501_090 Hb_006501_090 Hb_109980_010--Hb_006501_090 Hb_001655_030 Hb_001655_030 Hb_109980_010--Hb_001655_030 Hb_007657_010 Hb_007657_010 Hb_109980_010--Hb_007657_010 Hb_000935_010 Hb_000935_010 Hb_109980_010--Hb_000935_010 Hb_004319_080 Hb_004319_080 Hb_000035_470--Hb_004319_080 Hb_001021_150 Hb_001021_150 Hb_000035_470--Hb_001021_150 Hb_168978_030 Hb_168978_030 Hb_000035_470--Hb_168978_030 Hb_002073_190 Hb_002073_190 Hb_000035_470--Hb_002073_190 Hb_000035_470--Hb_000976_140 Hb_002849_130--Hb_005730_040 Hb_093458_040 Hb_093458_040 Hb_002849_130--Hb_093458_040 Hb_003428_010 Hb_003428_010 Hb_002849_130--Hb_003428_010 Hb_000441_090 Hb_000441_090 Hb_000258_070--Hb_000441_090 Hb_000258_070--Hb_002849_130 Hb_000340_530 Hb_000340_530 Hb_000258_070--Hb_000340_530 Hb_000258_070--Hb_000313_220 Hb_000347_430 Hb_000347_430 Hb_000258_070--Hb_000347_430
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.00157 5.58997 7.75893 7.96799 6.85864 7.589
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.14108 5.79747 5.29309 6.50014 7.9689

CAGE analysis