Hb_015817_010

Information

Type -
Description -
Location Contig15817: 4640-6769
Sequence    

Annotation

kegg
ID rcu:RCOM_1629060
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.18)
nr
ID XP_012089658.1
description PREDICTED: putative receptor protein kinase ZmPK1 [Jatropha curcas]
swissprot
ID P17801
description Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2
trembl
ID A0A067JSE0
description Serine/threonine-protein kinase OS=Jatropha curcas GN=JCGZ_01767 PE=3 SV=1
Gene Ontology
ID GO:0004672
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015817_010 0.0 - - PREDICTED: putative receptor protein kinase ZmPK1 [Jatropha curcas]
2 Hb_043935_010 0.0628315335 - - Receptor protein kinase-like protein [Medicago truncatula]
3 Hb_080791_010 0.0640389956 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
4 Hb_006147_020 0.0840965403 - - conserved hypothetical protein [Ricinus communis]
5 Hb_005029_030 0.0930701033 - - PREDICTED: LOW QUALITY PROTEIN: 36.4 kDa proline-rich protein-like [Sesamum indicum]
6 Hb_000026_060 0.0955606625 - - beta-1,3-glucanase [Manihot esculenta]
7 Hb_004459_050 0.1053400499 - - conserved hypothetical protein [Ricinus communis]
8 Hb_004392_030 0.1056655114 - - oxidoreductase family protein [Populus trichocarpa]
9 Hb_010381_080 0.1058472254 - - cytochrome P450, putative [Ricinus communis]
10 Hb_027654_010 0.1129278487 - - Isoamyl acetate-hydrolyzing esterase, putative [Ricinus communis]
11 Hb_000858_050 0.1210203297 - - kinase, putative [Ricinus communis]
12 Hb_002659_050 0.1210315 - - PREDICTED: AT-hook motif nuclear-localized protein 10 isoform X3 [Jatropha curcas]
13 Hb_004242_200 0.1210669765 transcription factor TF Family: C2H2 hypothetical protein POPTR_0001s44130g [Populus trichocarpa]
14 Hb_006133_010 0.123237275 - - PREDICTED: uncharacterized protein LOC104898613 [Beta vulgaris subsp. vulgaris]
15 Hb_012539_080 0.1278020405 - - Polyprotein, putative [Solanum demissum]
16 Hb_004146_030 0.131739292 - - UDP-glucosyltransferase, putative [Ricinus communis]
17 Hb_002041_020 0.1379200258 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
18 Hb_001699_020 0.1381555503 - - hypothetical protein L484_026849 [Morus notabilis]
19 Hb_015807_020 0.1401106122 - - gibberellin 20-oxidase, putative [Ricinus communis]
20 Hb_000270_040 0.1406940497 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_015817_010 Hb_015817_010 Hb_043935_010 Hb_043935_010 Hb_015817_010--Hb_043935_010 Hb_080791_010 Hb_080791_010 Hb_015817_010--Hb_080791_010 Hb_006147_020 Hb_006147_020 Hb_015817_010--Hb_006147_020 Hb_005029_030 Hb_005029_030 Hb_015817_010--Hb_005029_030 Hb_000026_060 Hb_000026_060 Hb_015817_010--Hb_000026_060 Hb_004459_050 Hb_004459_050 Hb_015817_010--Hb_004459_050 Hb_004392_030 Hb_004392_030 Hb_043935_010--Hb_004392_030 Hb_043935_010--Hb_006147_020 Hb_012539_080 Hb_012539_080 Hb_043935_010--Hb_012539_080 Hb_010381_080 Hb_010381_080 Hb_043935_010--Hb_010381_080 Hb_002659_050 Hb_002659_050 Hb_043935_010--Hb_002659_050 Hb_080791_010--Hb_000026_060 Hb_080791_010--Hb_006147_020 Hb_002041_020 Hb_002041_020 Hb_080791_010--Hb_002041_020 Hb_080791_010--Hb_043935_010 Hb_000858_050 Hb_000858_050 Hb_080791_010--Hb_000858_050 Hb_006147_020--Hb_004392_030 Hb_006147_020--Hb_012539_080 Hb_006147_020--Hb_010381_080 Hb_005029_030--Hb_000858_050 Hb_000270_040 Hb_000270_040 Hb_005029_030--Hb_000270_040 Hb_005029_030--Hb_080791_010 Hb_000476_030 Hb_000476_030 Hb_005029_030--Hb_000476_030 Hb_000135_080 Hb_000135_080 Hb_005029_030--Hb_000135_080 Hb_004146_030 Hb_004146_030 Hb_000026_060--Hb_004146_030 Hb_000026_060--Hb_000858_050 Hb_003171_040 Hb_003171_040 Hb_000026_060--Hb_003171_040 Hb_007426_070 Hb_007426_070 Hb_000026_060--Hb_007426_070 Hb_006133_010 Hb_006133_010 Hb_004459_050--Hb_006133_010 Hb_004459_050--Hb_002659_050 Hb_004459_050--Hb_043935_010 Hb_015807_020 Hb_015807_020 Hb_004459_050--Hb_015807_020 Hb_004459_050--Hb_010381_080 Hb_004459_050--Hb_080791_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.160392 0.0511935 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0685388 0.619582

CAGE analysis