Hb_015934_060

Information

Type -
Description -
Location Contig15934: 21579-31451
Sequence    

Annotation

kegg
ID pop:POPTR_0002s06080g
description POPTRDRAFT_830131; mitogen-activated protein kinase
nr
ID XP_012077899.1
description PREDICTED: mitogen-activated protein kinase 20 [Jatropha curcas]
swissprot
ID Q9SJG9
description Mitogen-activated protein kinase 20 OS=Arabidopsis thaliana GN=MPK20 PE=1 SV=2
trembl
ID A0A067KA08
description Mitogen-activated protein kinase OS=Jatropha curcas GN=JCGZ_13613 PE=4 SV=1
Gene Ontology
ID GO:0005622
description mitogen-activated protein kinase 20

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14151: 21607-31531
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015934_060 0.0 - - PREDICTED: mitogen-activated protein kinase 20 [Jatropha curcas]
2 Hb_000302_360 0.0918127578 - - beta-carotene hydroxylase, putative [Ricinus communis]
3 Hb_000049_280 0.1004411862 - - PREDICTED: ribokinase-like isoform X4 [Jatropha curcas]
4 Hb_003531_050 0.106525047 - - PREDICTED: pyridoxal reductase, chloroplastic [Jatropha curcas]
5 Hb_000645_260 0.1065318462 - - PREDICTED: uncharacterized protein LOC105643508 [Jatropha curcas]
6 Hb_010534_040 0.1108981863 - - PREDICTED: uncharacterized protein LOC105644385 isoform X1 [Jatropha curcas]
7 Hb_012833_010 0.1111060606 - - PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
8 Hb_014720_140 0.1144758554 - - PREDICTED: uncharacterized protein LOC105640367 [Jatropha curcas]
9 Hb_000486_020 0.1166407041 - - PREDICTED: L-type lectin-domain containing receptor kinase VIII.2 [Jatropha curcas]
10 Hb_001377_120 0.1185944262 - - PREDICTED: uncharacterized protein LOC105642861 [Jatropha curcas]
11 Hb_002890_160 0.1190019458 - - PREDICTED: protein root UVB sensitive 6 isoform X1 [Jatropha curcas]
12 Hb_001301_260 0.1199005031 - - PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like isoform X1 [Jatropha curcas]
13 Hb_033006_020 0.1211833035 - - Aspartate aminotransferase, putative [Ricinus communis]
14 Hb_000982_100 0.1266447388 transcription factor TF Family: bHLH PREDICTED: transcription factor PIF1-like isoform X1 [Jatropha curcas]
15 Hb_132356_010 0.126977837 - - receptor serine/threonine kinase, putative [Ricinus communis]
16 Hb_001606_010 0.1280131816 - - kinase, putative [Ricinus communis]
17 Hb_001269_060 0.1282693145 - - PREDICTED: probable receptor-like protein kinase At1g80640 isoform X1 [Jatropha curcas]
18 Hb_001352_030 0.1320250008 - - PREDICTED: uncharacterized protein LOC105636310 [Jatropha curcas]
19 Hb_001936_190 0.1330406973 - - hypothetical protein JCGZ_17780 [Jatropha curcas]
20 Hb_004531_170 0.1335195185 - - PREDICTED: probable inactive nicotinamidase At3g16190 [Jatropha curcas]

Gene co-expression network

sample Hb_015934_060 Hb_015934_060 Hb_000302_360 Hb_000302_360 Hb_015934_060--Hb_000302_360 Hb_000049_280 Hb_000049_280 Hb_015934_060--Hb_000049_280 Hb_003531_050 Hb_003531_050 Hb_015934_060--Hb_003531_050 Hb_000645_260 Hb_000645_260 Hb_015934_060--Hb_000645_260 Hb_010534_040 Hb_010534_040 Hb_015934_060--Hb_010534_040 Hb_012833_010 Hb_012833_010 Hb_015934_060--Hb_012833_010 Hb_000302_360--Hb_010534_040 Hb_001269_060 Hb_001269_060 Hb_000302_360--Hb_001269_060 Hb_000302_360--Hb_000645_260 Hb_001606_010 Hb_001606_010 Hb_000302_360--Hb_001606_010 Hb_014720_140 Hb_014720_140 Hb_000302_360--Hb_014720_140 Hb_007130_020 Hb_007130_020 Hb_000049_280--Hb_007130_020 Hb_002311_280 Hb_002311_280 Hb_000049_280--Hb_002311_280 Hb_001141_350 Hb_001141_350 Hb_000049_280--Hb_001141_350 Hb_000836_090 Hb_000836_090 Hb_000049_280--Hb_000836_090 Hb_004531_170 Hb_004531_170 Hb_000049_280--Hb_004531_170 Hb_001352_030 Hb_001352_030 Hb_003531_050--Hb_001352_030 Hb_003531_050--Hb_001606_010 Hb_001301_260 Hb_001301_260 Hb_003531_050--Hb_001301_260 Hb_002890_160 Hb_002890_160 Hb_003531_050--Hb_002890_160 Hb_000265_170 Hb_000265_170 Hb_003531_050--Hb_000265_170 Hb_003531_050--Hb_000302_360 Hb_000982_100 Hb_000982_100 Hb_000645_260--Hb_000982_100 Hb_000645_260--Hb_001269_060 Hb_000645_260--Hb_014720_140 Hb_033006_020 Hb_033006_020 Hb_000645_260--Hb_033006_020 Hb_001377_120 Hb_001377_120 Hb_000645_260--Hb_001377_120 Hb_000486_020 Hb_000486_020 Hb_010534_040--Hb_000486_020 Hb_010534_040--Hb_001352_030 Hb_010534_040--Hb_001606_010 Hb_010534_040--Hb_000645_260 Hb_010534_040--Hb_002890_160 Hb_060534_010 Hb_060534_010 Hb_012833_010--Hb_060534_010 Hb_004117_370 Hb_004117_370 Hb_012833_010--Hb_004117_370 Hb_012833_010--Hb_014720_140 Hb_012833_010--Hb_000982_100 Hb_000313_250 Hb_000313_250 Hb_012833_010--Hb_000313_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.39333 16.004 59.4557 33.5296 0.425756 0.440111
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.106959 0.0841675 3.3553 4.11209 42.7007

CAGE analysis