Hb_015934_090

Information

Type -
Description -
Location Contig15934: 48798-49664
Sequence    

Annotation

kegg
ID pop:POPTR_0005s22400g
description POPTRDRAFT_559476; hypothetical protein
nr
ID XP_012079790.1
description PREDICTED: uncharacterized protein LOC105640158 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KGZ6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15367 PE=4 SV=1
Gene Ontology
ID GO:0009743
description PREDICTED: uncharacterized protein LOC105640158

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015934_090 0.0 - - PREDICTED: uncharacterized protein LOC105640158 [Jatropha curcas]
2 Hb_000620_040 0.0696911819 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
3 Hb_003032_030 0.0764740118 transcription factor TF Family: G2-like PREDICTED: uncharacterized protein LOC105639296 isoform X1 [Jatropha curcas]
4 Hb_000749_300 0.0868365392 - - PREDICTED: uncharacterized protein LOC105129180 [Populus euphratica]
5 Hb_147006_010 0.0891175404 - - receptor like protein 35 [Arabidopsis thaliana]
6 Hb_163950_050 0.0929581373 - - protein binding protein, putative [Ricinus communis]
7 Hb_002986_030 0.0932887191 - - hypothetical protein JCGZ_12380 [Jatropha curcas]
8 Hb_001902_040 0.0952282873 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002073_270 0.095494927 desease resistance Gene Name: TIR PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
10 Hb_020375_010 0.0960811576 - - PREDICTED: transcription factor IBH1 [Jatropha curcas]
11 Hb_000000_050 0.0995673028 - - conserved hypothetical protein [Ricinus communis]
12 Hb_009522_010 0.1065730546 - - hypothetical protein POPTR_0006s18790g [Populus trichocarpa]
13 Hb_003893_130 0.1068207484 - - metal ion binding protein, putative [Ricinus communis]
14 Hb_133974_010 0.1087122978 - - PREDICTED: glucan endo-1,3-beta-glucosidase 3-like isoform X2 [Populus euphratica]
15 Hb_001541_210 0.1135498971 - - hypothetical protein POPTR_0008s19020g [Populus trichocarpa]
16 Hb_001366_300 0.11383592 - - GERMIN-LIKE protein 10 [Populus trichocarpa]
17 Hb_000083_210 0.1140763795 - - Major facilitator superfamily protein, putative [Theobroma cacao]
18 Hb_185726_010 0.1157568637 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
19 Hb_000270_380 0.1168174926 - - PREDICTED: microtubule-associated protein TORTIFOLIA1 [Jatropha curcas]
20 Hb_009620_110 0.1169831601 - - -

Gene co-expression network

sample Hb_015934_090 Hb_015934_090 Hb_000620_040 Hb_000620_040 Hb_015934_090--Hb_000620_040 Hb_003032_030 Hb_003032_030 Hb_015934_090--Hb_003032_030 Hb_000749_300 Hb_000749_300 Hb_015934_090--Hb_000749_300 Hb_147006_010 Hb_147006_010 Hb_015934_090--Hb_147006_010 Hb_163950_050 Hb_163950_050 Hb_015934_090--Hb_163950_050 Hb_002986_030 Hb_002986_030 Hb_015934_090--Hb_002986_030 Hb_000620_040--Hb_003032_030 Hb_000620_040--Hb_147006_010 Hb_003893_130 Hb_003893_130 Hb_000620_040--Hb_003893_130 Hb_010164_030 Hb_010164_030 Hb_000620_040--Hb_010164_030 Hb_020375_010 Hb_020375_010 Hb_000620_040--Hb_020375_010 Hb_003032_030--Hb_147006_010 Hb_003032_030--Hb_020375_010 Hb_009023_010 Hb_009023_010 Hb_003032_030--Hb_009023_010 Hb_003032_030--Hb_000749_300 Hb_001902_040 Hb_001902_040 Hb_000749_300--Hb_001902_040 Hb_000749_300--Hb_002986_030 Hb_000083_210 Hb_000083_210 Hb_000749_300--Hb_000083_210 Hb_185726_010 Hb_185726_010 Hb_000749_300--Hb_185726_010 Hb_000462_010 Hb_000462_010 Hb_000749_300--Hb_000462_010 Hb_147006_010--Hb_010164_030 Hb_133974_010 Hb_133974_010 Hb_147006_010--Hb_133974_010 Hb_004032_290 Hb_004032_290 Hb_147006_010--Hb_004032_290 Hb_002613_040 Hb_002613_040 Hb_163950_050--Hb_002613_040 Hb_000103_130 Hb_000103_130 Hb_163950_050--Hb_000103_130 Hb_163950_050--Hb_002986_030 Hb_004032_190 Hb_004032_190 Hb_163950_050--Hb_004032_190 Hb_001206_100 Hb_001206_100 Hb_163950_050--Hb_001206_100 Hb_002986_030--Hb_001902_040 Hb_010978_020 Hb_010978_020 Hb_002986_030--Hb_010978_020 Hb_002986_030--Hb_003032_030 Hb_002986_030--Hb_001206_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.495 3.54261 10.7523 0.0743966 0.0308428
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0477621 0.086999 0.192819 8.40456

CAGE analysis