Hb_016093_030

Information

Type -
Description -
Location Contig16093: 15759-17214
Sequence    

Annotation

kegg
ID tcc:TCM_042938
description Ankyrin repeat family protein
nr
ID BAG15869.1
description ankyrin repeat protein [Bruguiera gymnorhiza]
swissprot
ID Q9ZU96
description Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana GN=At2g01680 PE=2 SV=1
trembl
ID B1Q4U3
description Ankyrin repeat protein OS=Bruguiera gymnorhiza PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_016093_030 0.0 - - ankyrin repeat protein [Bruguiera gymnorhiza]
2 Hb_000329_440 0.0926895725 - - PREDICTED: F-box protein At5g51370-like [Jatropha curcas]
3 Hb_060253_010 0.0954977008 - - hypothetical protein JCGZ_14707 [Jatropha curcas]
4 Hb_005569_010 0.1005416875 - - Heme-binding protein, putative [Ricinus communis]
5 Hb_001491_070 0.1039254848 - - PREDICTED: probable beta-1,3-galactosyltransferase 17 isoform X1 [Jatropha curcas]
6 Hb_000984_160 0.105811016 - - PREDICTED: amino acid permease 6-like isoform X1 [Jatropha curcas]
7 Hb_131876_010 0.1063507947 transcription factor TF Family: MYB PREDICTED: myb-related protein 308-like isoform X1 [Jatropha curcas]
8 Hb_000520_040 0.1071503949 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
9 Hb_000627_050 0.109737846 - - PREDICTED: uncharacterized protein LOC105632845 [Jatropha curcas]
10 Hb_004835_020 0.1137076464 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
11 Hb_002025_070 0.1144508262 - - PREDICTED: pentatricopeptide repeat-containing protein At5g13770, chloroplastic-like isoform X1 [Populus euphratica]
12 Hb_000703_120 0.1149646415 - - PREDICTED: uncharacterized protein LOC105635706 isoform X1 [Jatropha curcas]
13 Hb_000424_130 0.1151954503 - - PREDICTED: monoacylglycerol lipase abhd6-B-like [Jatropha curcas]
14 Hb_001210_060 0.1165925681 - - PREDICTED: pleiotropic drug resistance protein 1-like [Jatropha curcas]
15 Hb_000424_140 0.1166069814 - - Protein kinase APK1A, chloroplast precursor, putative [Ricinus communis]
16 Hb_001098_040 0.116657015 - - hypothetical protein JCGZ_00749 [Jatropha curcas]
17 Hb_000212_410 0.1170842641 - - PREDICTED: serine carboxypeptidase 1-like [Jatropha curcas]
18 Hb_000140_460 0.1171121518 - - PREDICTED: uncharacterized protein LOC105628417 [Jatropha curcas]
19 Hb_009788_020 0.1179976563 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Jatropha curcas]
20 Hb_002572_040 0.1181578546 - - PREDICTED: uncharacterized protein LOC105635149 [Jatropha curcas]

Gene co-expression network

sample Hb_016093_030 Hb_016093_030 Hb_000329_440 Hb_000329_440 Hb_016093_030--Hb_000329_440 Hb_060253_010 Hb_060253_010 Hb_016093_030--Hb_060253_010 Hb_005569_010 Hb_005569_010 Hb_016093_030--Hb_005569_010 Hb_001491_070 Hb_001491_070 Hb_016093_030--Hb_001491_070 Hb_000984_160 Hb_000984_160 Hb_016093_030--Hb_000984_160 Hb_131876_010 Hb_131876_010 Hb_016093_030--Hb_131876_010 Hb_000520_040 Hb_000520_040 Hb_000329_440--Hb_000520_040 Hb_001098_040 Hb_001098_040 Hb_000329_440--Hb_001098_040 Hb_000500_240 Hb_000500_240 Hb_000329_440--Hb_000500_240 Hb_004835_020 Hb_004835_020 Hb_000329_440--Hb_004835_020 Hb_102179_010 Hb_102179_010 Hb_000329_440--Hb_102179_010 Hb_005694_160 Hb_005694_160 Hb_000329_440--Hb_005694_160 Hb_003435_030 Hb_003435_030 Hb_060253_010--Hb_003435_030 Hb_007270_020 Hb_007270_020 Hb_060253_010--Hb_007270_020 Hb_060253_010--Hb_000520_040 Hb_000046_120 Hb_000046_120 Hb_060253_010--Hb_000046_120 Hb_000212_410 Hb_000212_410 Hb_060253_010--Hb_000212_410 Hb_009788_020 Hb_009788_020 Hb_060253_010--Hb_009788_020 Hb_005569_010--Hb_004835_020 Hb_005569_010--Hb_000984_160 Hb_000424_140 Hb_000424_140 Hb_005569_010--Hb_000424_140 Hb_003195_080 Hb_003195_080 Hb_005569_010--Hb_003195_080 Hb_005569_010--Hb_000329_440 Hb_000958_090 Hb_000958_090 Hb_005569_010--Hb_000958_090 Hb_172426_070 Hb_172426_070 Hb_001491_070--Hb_172426_070 Hb_005018_010 Hb_005018_010 Hb_001491_070--Hb_005018_010 Hb_003163_010 Hb_003163_010 Hb_001491_070--Hb_003163_010 Hb_002001_030 Hb_002001_030 Hb_001491_070--Hb_002001_030 Hb_000424_130 Hb_000424_130 Hb_001491_070--Hb_000424_130 Hb_000139_360 Hb_000139_360 Hb_001491_070--Hb_000139_360 Hb_000984_160--Hb_131876_010 Hb_004052_030 Hb_004052_030 Hb_000984_160--Hb_004052_030 Hb_069696_020 Hb_069696_020 Hb_000984_160--Hb_069696_020 Hb_001946_120 Hb_001946_120 Hb_000984_160--Hb_001946_120 Hb_000847_030 Hb_000847_030 Hb_000984_160--Hb_000847_030 Hb_002073_150 Hb_002073_150 Hb_131876_010--Hb_002073_150 Hb_131876_010--Hb_069696_020 Hb_012389_010 Hb_012389_010 Hb_131876_010--Hb_012389_010 Hb_000041_210 Hb_000041_210 Hb_131876_010--Hb_000041_210 Hb_000627_050 Hb_000627_050 Hb_131876_010--Hb_000627_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.172153 1.12356 1.05562 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0542454 0.16268 1.75071

CAGE analysis