Hb_017014_010

Information

Type -
Description -
Location Contig17014: 2560-3947
Sequence    

Annotation

kegg
ID cam:101502691
description syntaxin-132-like
nr
ID XP_012086349.1
description PREDICTED: syntaxin-132-like isoform X1 [Jatropha curcas]
swissprot
ID Q9SRV7
description Putative syntaxin-131 OS=Arabidopsis thaliana GN=SYP131 PE=3 SV=1
trembl
ID A0A067K216
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22874 PE=4 SV=1
Gene Ontology
ID GO:0005622
description syntaxin-132-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_017014_010 0.0 - - PREDICTED: syntaxin-132-like isoform X1 [Jatropha curcas]
2 Hb_000889_100 0.1056864823 - - PREDICTED: syntaxin-132-like isoform X2 [Sesamum indicum]
3 Hb_002611_030 0.1122045768 - - PREDICTED: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [Jatropha curcas]
4 Hb_010003_010 0.1351077911 - - PREDICTED: uncharacterized protein LOC105630174 isoform X2 [Jatropha curcas]
5 Hb_100137_010 0.1384335578 - - hypothetical protein JCGZ_17848 [Jatropha curcas]
6 Hb_048702_010 0.140106602 - - PREDICTED: ER membrane protein complex subunit 7 homolog isoform X1 [Jatropha curcas]
7 Hb_000077_290 0.1424830728 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003071_070 0.1425313051 - - sucrose synthase 3 [Hevea brasiliensis]
9 Hb_004040_030 0.1576941244 - - PREDICTED: probable inactive purple acid phosphatase 28 isoform X2 [Jatropha curcas]
10 Hb_004225_110 0.1602160146 - - PREDICTED: ABC transporter G family member 28 [Jatropha curcas]
11 Hb_002660_110 0.1615451677 - - PREDICTED: serine/threonine-protein kinase-like protein CCR1 isoform X1 [Jatropha curcas]
12 Hb_000103_250 0.1623944681 transcription factor TF Family: Tify PREDICTED: protein TIFY 4B isoform X3 [Jatropha curcas]
13 Hb_004466_060 0.1631139755 - - hypothetical protein POPTR_0009s12110g [Populus trichocarpa]
14 Hb_000094_290 0.1660356189 - - PREDICTED: outer envelope pore protein 24B, chloroplastic-like [Jatropha curcas]
15 Hb_000622_350 0.1662932517 - - PREDICTED: protein ABIL1 [Jatropha curcas]
16 Hb_003052_180 0.1671632076 - - Diacylglycerol Cholinephosphotransferase [Ricinus communis]
17 Hb_001474_040 0.1693580121 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 [Jatropha curcas]
18 Hb_051257_010 0.1735082267 - - -
19 Hb_000035_220 0.1740138026 - - PREDICTED: transmembrane 9 superfamily member 8 [Jatropha curcas]
20 Hb_012194_060 0.1758846864 - - PREDICTED: uncharacterized protein LOC105636108 [Jatropha curcas]

Gene co-expression network

sample Hb_017014_010 Hb_017014_010 Hb_000889_100 Hb_000889_100 Hb_017014_010--Hb_000889_100 Hb_002611_030 Hb_002611_030 Hb_017014_010--Hb_002611_030 Hb_010003_010 Hb_010003_010 Hb_017014_010--Hb_010003_010 Hb_100137_010 Hb_100137_010 Hb_017014_010--Hb_100137_010 Hb_048702_010 Hb_048702_010 Hb_017014_010--Hb_048702_010 Hb_000077_290 Hb_000077_290 Hb_017014_010--Hb_000077_290 Hb_051257_010 Hb_051257_010 Hb_000889_100--Hb_051257_010 Hb_000035_220 Hb_000035_220 Hb_000889_100--Hb_000035_220 Hb_164010_050 Hb_164010_050 Hb_000889_100--Hb_164010_050 Hb_000622_350 Hb_000622_350 Hb_000889_100--Hb_000622_350 Hb_000094_290 Hb_000094_290 Hb_000889_100--Hb_000094_290 Hb_002611_030--Hb_100137_010 Hb_004466_060 Hb_004466_060 Hb_002611_030--Hb_004466_060 Hb_002611_030--Hb_048702_010 Hb_009083_030 Hb_009083_030 Hb_002611_030--Hb_009083_030 Hb_002611_030--Hb_010003_010 Hb_010003_010--Hb_000889_100 Hb_010003_010--Hb_000094_290 Hb_010003_010--Hb_000077_290 Hb_000230_180 Hb_000230_180 Hb_010003_010--Hb_000230_180 Hb_010003_010--Hb_051257_010 Hb_005170_010 Hb_005170_010 Hb_010003_010--Hb_005170_010 Hb_100137_010--Hb_004466_060 Hb_100137_010--Hb_048702_010 Hb_100137_010--Hb_000077_290 Hb_122636_010 Hb_122636_010 Hb_100137_010--Hb_122636_010 Hb_001217_010 Hb_001217_010 Hb_100137_010--Hb_001217_010 Hb_006634_110 Hb_006634_110 Hb_048702_010--Hb_006634_110 Hb_048702_010--Hb_122636_010 Hb_010577_010 Hb_010577_010 Hb_048702_010--Hb_010577_010 Hb_000077_290--Hb_005170_010 Hb_000077_290--Hb_000230_180 Hb_004525_040 Hb_004525_040 Hb_000077_290--Hb_004525_040 Hb_012194_060 Hb_012194_060 Hb_000077_290--Hb_012194_060 Hb_000035_330 Hb_000035_330 Hb_000077_290--Hb_000035_330 Hb_000077_290--Hb_000889_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.4187 12.552 30.2317 133.511 11.4536 55.7654
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.58876 8.59801 26.5089 22.0536 32.5246

CAGE analysis