Hb_017524_010

Information

Type -
Description -
Location Contig17524: 15589-17084
Sequence    

Annotation

kegg
ID bvg:104907627
description uncharacterized LOC104907627
nr
ID XP_010694888.1
description PREDICTED: uncharacterized protein LOC104907627 [Beta vulgaris subsp. vulgaris]
swissprot
ID -
description -
trembl
ID I1IWC2
description Uncharacterized protein OS=Brachypodium distachyon GN=BRADI5G03654 PE=4 SV=1
Gene Ontology
ID GO:0016740
description solanesyl diphosphate synthase 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_017524_010 0.0 - - PREDICTED: uncharacterized protein LOC104907627 [Beta vulgaris subsp. vulgaris]
2 Hb_000465_360 0.1950119508 - - hypothetical protein CISIN_1g024854mg [Citrus sinensis]
3 Hb_124302_030 0.1998303127 - - PREDICTED: serine carboxypeptidase-like [Beta vulgaris subsp. vulgaris]
4 Hb_001749_030 0.2291882549 - - -
5 Hb_069232_010 0.2381995226 - - PREDICTED: 60S ribosomal protein L37-3-like [Vitis vinifera]
6 Hb_000844_010 0.241987749 - - PREDICTED: lysine histidine transporter-like 8 [Jatropha curcas]
7 Hb_017417_020 0.2421469466 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
8 Hb_081448_010 0.2497426694 - - hypothetical protein JCGZ_11284 [Jatropha curcas]
9 Hb_000703_320 0.2510421409 - - receptor-kinase, putative [Ricinus communis]
10 Hb_141142_010 0.2512262303 - - hypothetical protein JCGZ_21320 [Jatropha curcas]
11 Hb_000331_690 0.2571548469 - - PREDICTED: F-box/WD repeat-containing protein 11-like [Jatropha curcas]
12 Hb_000270_010 0.2571678575 - - conserved hypothetical protein [Ricinus communis]
13 Hb_005380_030 0.2610575346 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120 isoform X2 [Jatropha curcas]
14 Hb_005203_010 0.2611221538 - - PREDICTED: probable nucleolar protein 5-1 [Jatropha curcas]
15 Hb_000431_180 0.2628424578 - - PREDICTED: peroxidase 55 [Jatropha curcas]
16 Hb_000127_070 0.2642270136 - - PREDICTED: peroxidase 12-like [Jatropha curcas]
17 Hb_004218_230 0.2645740106 - - Peptide transporter, putative [Ricinus communis]
18 Hb_002241_020 0.2657515629 - - PREDICTED: salicylic acid-binding protein 2-like [Jatropha curcas]
19 Hb_031862_090 0.2733549439 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like [Jatropha curcas]
20 Hb_002248_090 0.2734247735 - - metallothionein 3-like protein [Hevea brasiliensis]

Gene co-expression network

sample Hb_017524_010 Hb_017524_010 Hb_000465_360 Hb_000465_360 Hb_017524_010--Hb_000465_360 Hb_124302_030 Hb_124302_030 Hb_017524_010--Hb_124302_030 Hb_001749_030 Hb_001749_030 Hb_017524_010--Hb_001749_030 Hb_069232_010 Hb_069232_010 Hb_017524_010--Hb_069232_010 Hb_000844_010 Hb_000844_010 Hb_017524_010--Hb_000844_010 Hb_017417_020 Hb_017417_020 Hb_017524_010--Hb_017417_020 Hb_004218_230 Hb_004218_230 Hb_000465_360--Hb_004218_230 Hb_001269_280 Hb_001269_280 Hb_000465_360--Hb_001269_280 Hb_009252_110 Hb_009252_110 Hb_000465_360--Hb_009252_110 Hb_000127_070 Hb_000127_070 Hb_000465_360--Hb_000127_070 Hb_005888_040 Hb_005888_040 Hb_000465_360--Hb_005888_040 Hb_002701_140 Hb_002701_140 Hb_124302_030--Hb_002701_140 Hb_003175_020 Hb_003175_020 Hb_124302_030--Hb_003175_020 Hb_000940_020 Hb_000940_020 Hb_124302_030--Hb_000940_020 Hb_128912_010 Hb_128912_010 Hb_124302_030--Hb_128912_010 Hb_006351_080 Hb_006351_080 Hb_124302_030--Hb_006351_080 Hb_004586_380 Hb_004586_380 Hb_124302_030--Hb_004586_380 Hb_000659_020 Hb_000659_020 Hb_001749_030--Hb_000659_020 Hb_001373_020 Hb_001373_020 Hb_001749_030--Hb_001373_020 Hb_141142_010 Hb_141142_010 Hb_001749_030--Hb_141142_010 Hb_133508_010 Hb_133508_010 Hb_001749_030--Hb_133508_010 Hb_170516_010 Hb_170516_010 Hb_001749_030--Hb_170516_010 Hb_069232_010--Hb_017417_020 Hb_081448_010 Hb_081448_010 Hb_069232_010--Hb_081448_010 Hb_000703_320 Hb_000703_320 Hb_069232_010--Hb_000703_320 Hb_000270_010 Hb_000270_010 Hb_069232_010--Hb_000270_010 Hb_000331_690 Hb_000331_690 Hb_069232_010--Hb_000331_690 Hb_005203_010 Hb_005203_010 Hb_069232_010--Hb_005203_010 Hb_000141_220 Hb_000141_220 Hb_000844_010--Hb_000141_220 Hb_017417_030 Hb_017417_030 Hb_000844_010--Hb_017417_030 Hb_164010_090 Hb_164010_090 Hb_000844_010--Hb_164010_090 Hb_000844_010--Hb_141142_010 Hb_135811_060 Hb_135811_060 Hb_000844_010--Hb_135811_060 Hb_133636_010 Hb_133636_010 Hb_000844_010--Hb_133636_010 Hb_017417_020--Hb_000270_010 Hb_017417_020--Hb_000331_690 Hb_017417_020--Hb_081448_010 Hb_000128_010 Hb_000128_010 Hb_017417_020--Hb_000128_010 Hb_000431_180 Hb_000431_180 Hb_017417_020--Hb_000431_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.119626 0 0.0476135 0.0247989 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0385639 0

CAGE analysis