Hb_018124_010

Information

Type -
Description -
Location Contig18124: 10288-14276
Sequence    

Annotation

kegg
ID pop:POPTR_0006s09660g
description POPTRDRAFT_560866; UNCOUPLING family protein
nr
ID XP_012087936.1
description PREDICTED: mitochondrial uncoupling protein 1 isoform X2 [Jatropha curcas]
swissprot
ID O81845
description Mitochondrial uncoupling protein 1 OS=Arabidopsis thaliana GN=PUMP1 PE=1 SV=1
trembl
ID A0A067JWW2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25064 PE=3 SV=1
Gene Ontology
ID GO:0005774
description mitochondrial uncoupling protein 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17602: 10479-14238
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_018124_010 0.0 - - PREDICTED: mitochondrial uncoupling protein 1 isoform X2 [Jatropha curcas]
2 Hb_004767_080 0.0724411846 - - PREDICTED: mitochondrial ATPase complex subunit ATP10 isoform X1 [Jatropha curcas]
3 Hb_143766_010 0.0778141232 - - PREDICTED: uncharacterized protein LOC105637787 [Jatropha curcas]
4 Hb_003787_010 0.0782496677 - - PREDICTED: 40S ribosomal protein S3-3-like [Phoenix dactylifera]
5 Hb_004052_050 0.0791152533 - - PREDICTED: uncharacterized protein LOC105640640 [Jatropha curcas]
6 Hb_000417_360 0.0794949914 - - PREDICTED: hexaprenyldihydroxybenzoate methyltransferase, mitochondrial [Jatropha curcas]
7 Hb_000701_100 0.0807616514 - - PREDICTED: ribose-phosphate pyrophosphokinase 1 [Jatropha curcas]
8 Hb_001057_040 0.0810519287 - - PREDICTED: oligosaccharyltransferase complex subunit ostc [Jatropha curcas]
9 Hb_000221_160 0.0810527079 - - PREDICTED: cytochrome c oxidase subunit 6b-1 [Jatropha curcas]
10 Hb_033594_150 0.0817308873 - - unknown [Lotus japonicus]
11 Hb_000805_240 0.0839684023 - - PREDICTED: uncharacterized protein C20orf24 homolog [Jatropha curcas]
12 Hb_152784_010 0.0840418854 - - hypothetical protein PRUPE_ppa010913mg [Prunus persica]
13 Hb_000189_240 0.0840993891 - - PREDICTED: PITH domain-containing protein At3g04780 [Jatropha curcas]
14 Hb_010175_040 0.085306881 - - PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Jatropha curcas]
15 Hb_000363_360 0.0872477397 - - hypothetical protein PRUPE_ppa009146mg [Prunus persica]
16 Hb_000217_030 0.0893950829 - - Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1 [Theobroma cacao]
17 Hb_001616_040 0.0903015528 - - PREDICTED: uncharacterized protein LOC105644362 [Jatropha curcas]
18 Hb_004102_070 0.0904530605 - - Cytochrome c oxidase subunit 5b-2, mitochondrial -like protein [Gossypium arboreum]
19 Hb_034406_030 0.0906480563 - - PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial [Musa acuminata subsp. malaccensis]
20 Hb_000571_020 0.091822085 - - PREDICTED: BAG family molecular chaperone regulator 4 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_018124_010 Hb_018124_010 Hb_004767_080 Hb_004767_080 Hb_018124_010--Hb_004767_080 Hb_143766_010 Hb_143766_010 Hb_018124_010--Hb_143766_010 Hb_003787_010 Hb_003787_010 Hb_018124_010--Hb_003787_010 Hb_004052_050 Hb_004052_050 Hb_018124_010--Hb_004052_050 Hb_000417_360 Hb_000417_360 Hb_018124_010--Hb_000417_360 Hb_000701_100 Hb_000701_100 Hb_018124_010--Hb_000701_100 Hb_005305_150 Hb_005305_150 Hb_004767_080--Hb_005305_150 Hb_091433_020 Hb_091433_020 Hb_004767_080--Hb_091433_020 Hb_011671_100 Hb_011671_100 Hb_004767_080--Hb_011671_100 Hb_004767_080--Hb_000417_360 Hb_002056_050 Hb_002056_050 Hb_004767_080--Hb_002056_050 Hb_007012_060 Hb_007012_060 Hb_143766_010--Hb_007012_060 Hb_004102_070 Hb_004102_070 Hb_143766_010--Hb_004102_070 Hb_027654_050 Hb_027654_050 Hb_143766_010--Hb_027654_050 Hb_010175_040 Hb_010175_040 Hb_143766_010--Hb_010175_040 Hb_021596_090 Hb_021596_090 Hb_143766_010--Hb_021596_090 Hb_009182_010 Hb_009182_010 Hb_143766_010--Hb_009182_010 Hb_000217_030 Hb_000217_030 Hb_003787_010--Hb_000217_030 Hb_002995_020 Hb_002995_020 Hb_003787_010--Hb_002995_020 Hb_172426_040 Hb_172426_040 Hb_003787_010--Hb_172426_040 Hb_005846_040 Hb_005846_040 Hb_003787_010--Hb_005846_040 Hb_000020_060 Hb_000020_060 Hb_003787_010--Hb_000020_060 Hb_015279_010 Hb_015279_010 Hb_003787_010--Hb_015279_010 Hb_009486_020 Hb_009486_020 Hb_004052_050--Hb_009486_020 Hb_000805_240 Hb_000805_240 Hb_004052_050--Hb_000805_240 Hb_001247_100 Hb_001247_100 Hb_004052_050--Hb_001247_100 Hb_152784_010 Hb_152784_010 Hb_004052_050--Hb_152784_010 Hb_007192_100 Hb_007192_100 Hb_004052_050--Hb_007192_100 Hb_000417_360--Hb_010175_040 Hb_000417_360--Hb_091433_020 Hb_000920_110 Hb_000920_110 Hb_000417_360--Hb_000920_110 Hb_000731_190 Hb_000731_190 Hb_000417_360--Hb_000731_190 Hb_001085_120 Hb_001085_120 Hb_000417_360--Hb_001085_120 Hb_000261_140 Hb_000261_140 Hb_000417_360--Hb_000261_140 Hb_001057_040 Hb_001057_040 Hb_000701_100--Hb_001057_040 Hb_004899_370 Hb_004899_370 Hb_000701_100--Hb_004899_370 Hb_000701_100--Hb_000805_240 Hb_005269_080 Hb_005269_080 Hb_000701_100--Hb_005269_080 Hb_000005_090 Hb_000005_090 Hb_000701_100--Hb_000005_090 Hb_003414_050 Hb_003414_050 Hb_000701_100--Hb_003414_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.12 10.8401 13.6312 26.5793 11.5087 13.5866
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
37.7555 45.8978 28.5922 21.2653 11.6096

CAGE analysis