Hb_018202_030

Information

Type -
Description -
Location Contig18202: 23765-24471
Sequence    

Annotation

kegg
ID fve:101309247
description uncharacterized protein LOC101309247
nr
ID XP_008356060.1
description PREDICTED: uncharacterized protein LOC103419743 [Malus domestica]
swissprot
ID -
description -
trembl
ID M5XQU7
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020120mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_018202_030 0.0 - - PREDICTED: uncharacterized protein LOC103419743 [Malus domestica]
2 Hb_012146_030 0.1985719228 - - -
3 Hb_006649_070 0.2224732715 - - unknown [Lotus japonicus]
4 Hb_044187_010 0.2317610563 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
5 Hb_006054_050 0.2346545567 - - PREDICTED: uncharacterized protein LOC105649250, partial [Jatropha curcas]
6 Hb_164804_010 0.2348548614 - - JHL23J11.8 [Jatropha curcas]
7 Hb_101832_010 0.2353749525 - - nitrate transporter, putative [Ricinus communis]
8 Hb_005539_360 0.2379144668 - - kinesin light chain, putative [Ricinus communis]
9 Hb_095595_010 0.239568401 - - PREDICTED: caffeoylshikimate esterase-like [Jatropha curcas]
10 Hb_002963_020 0.2408726523 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001258_030 0.2429782416 - - tRNA-dihydrouridine synthase, putative [Ricinus communis]
12 Hb_000160_300 0.2431147932 - - hypothetical protein POPTR_0004s08720g [Populus trichocarpa]
13 Hb_007426_160 0.2447958643 - - -
14 Hb_000977_210 0.2471461519 - - chromatin assembly factor 1, subunit A, putative [Ricinus communis]
15 Hb_002639_140 0.2541476157 - - PREDICTED: 4-coumarate--CoA ligase-like 5 [Jatropha curcas]
16 Hb_006788_160 0.2553546018 - - hypothetical protein POPTR_0002s04680g [Populus trichocarpa]
17 Hb_000836_530 0.2560541181 - - PREDICTED: uncharacterized protein LOC105634429 [Jatropha curcas]
18 Hb_004097_050 0.2573362606 - - PREDICTED: squalene monooxygenase-like [Jatropha curcas]
19 Hb_003058_040 0.2581717055 - - rotamase, putative [Ricinus communis]
20 Hb_002025_200 0.2585043725 - - -

Gene co-expression network

sample Hb_018202_030 Hb_018202_030 Hb_012146_030 Hb_012146_030 Hb_018202_030--Hb_012146_030 Hb_006649_070 Hb_006649_070 Hb_018202_030--Hb_006649_070 Hb_044187_010 Hb_044187_010 Hb_018202_030--Hb_044187_010 Hb_006054_050 Hb_006054_050 Hb_018202_030--Hb_006054_050 Hb_164804_010 Hb_164804_010 Hb_018202_030--Hb_164804_010 Hb_101832_010 Hb_101832_010 Hb_018202_030--Hb_101832_010 Hb_002217_260 Hb_002217_260 Hb_012146_030--Hb_002217_260 Hb_001951_180 Hb_001951_180 Hb_012146_030--Hb_001951_180 Hb_000087_140 Hb_000087_140 Hb_012146_030--Hb_000087_140 Hb_000702_080 Hb_000702_080 Hb_012146_030--Hb_000702_080 Hb_012146_030--Hb_006054_050 Hb_001080_090 Hb_001080_090 Hb_012146_030--Hb_001080_090 Hb_004117_350 Hb_004117_350 Hb_006649_070--Hb_004117_350 Hb_006649_070--Hb_012146_030 Hb_006132_070 Hb_006132_070 Hb_006649_070--Hb_006132_070 Hb_029610_010 Hb_029610_010 Hb_006649_070--Hb_029610_010 Hb_006649_070--Hb_006054_050 Hb_001258_030 Hb_001258_030 Hb_044187_010--Hb_001258_030 Hb_044187_010--Hb_000702_080 Hb_012022_070 Hb_012022_070 Hb_044187_010--Hb_012022_070 Hb_044187_010--Hb_012146_030 Hb_004097_050 Hb_004097_050 Hb_044187_010--Hb_004097_050 Hb_005237_050 Hb_005237_050 Hb_044187_010--Hb_005237_050 Hb_015026_080 Hb_015026_080 Hb_006054_050--Hb_015026_080 Hb_000753_200 Hb_000753_200 Hb_006054_050--Hb_000753_200 Hb_006788_160 Hb_006788_160 Hb_006054_050--Hb_006788_160 Hb_035755_010 Hb_035755_010 Hb_006054_050--Hb_035755_010 Hb_000130_260 Hb_000130_260 Hb_006054_050--Hb_000130_260 Hb_006198_110 Hb_006198_110 Hb_164804_010--Hb_006198_110 Hb_002942_190 Hb_002942_190 Hb_164804_010--Hb_002942_190 Hb_002963_020 Hb_002963_020 Hb_164804_010--Hb_002963_020 Hb_005539_360 Hb_005539_360 Hb_164804_010--Hb_005539_360 Hb_000111_360 Hb_000111_360 Hb_164804_010--Hb_000111_360 Hb_004657_050 Hb_004657_050 Hb_164804_010--Hb_004657_050 Hb_002226_030 Hb_002226_030 Hb_101832_010--Hb_002226_030 Hb_000345_390 Hb_000345_390 Hb_101832_010--Hb_000345_390 Hb_116349_100 Hb_116349_100 Hb_101832_010--Hb_116349_100 Hb_001053_180 Hb_001053_180 Hb_101832_010--Hb_001053_180 Hb_000630_070 Hb_000630_070 Hb_101832_010--Hb_000630_070 Hb_002054_010 Hb_002054_010 Hb_101832_010--Hb_002054_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.424972 0.0773168 0.0334465 0 0.194368 0.0964387
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.287931 0.226305 0.132587 0.0617487 0.440306

CAGE analysis