Hb_018599_010

Information

Type -
Description -
Location Contig18599: 3741-4506
Sequence    

Annotation

kegg
ID brp:103848430
description DNA-binding protein HEXBP-like
nr
ID XP_012080767.1
description PREDICTED: uncharacterized protein LOC105640954 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L4H3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03682 PE=4 SV=1
Gene Ontology
ID GO:0003676
description PREDICTED: uncharacterized protein LOC105640954

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_018599_010 0.0 - - PREDICTED: uncharacterized protein LOC105640954 [Jatropha curcas]
2 Hb_000710_010 0.176316915 - - PREDICTED: uncharacterized protein LOC105630356 [Jatropha curcas]
3 Hb_031403_020 0.192369819 - - PREDICTED: uncharacterized protein LOC105632145 [Jatropha curcas]
4 Hb_007778_020 0.1980118854 - - -
5 Hb_014720_170 0.1995607437 - - glutaredoxin-1, grx1, putative [Ricinus communis]
6 Hb_001427_050 0.2006400937 - - PREDICTED: probable protein arginine N-methyltransferase 1.2 [Jatropha curcas]
7 Hb_002374_280 0.2049425484 - - -
8 Hb_007083_010 0.2075176409 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like, partial [Nelumbo nucifera]
9 Hb_000504_170 0.208281603 - - hypothetical protein B456_006G033900 [Gossypium raimondii]
10 Hb_001195_570 0.2140431727 - - PREDICTED: peroxisomal membrane protein 11A [Jatropha curcas]
11 Hb_005511_170 0.2172037324 - - hypothetical protein CISIN_1g030718mg [Citrus sinensis]
12 Hb_004976_020 0.2206101452 - - PREDICTED: probable nucleolar protein 5-1 [Jatropha curcas]
13 Hb_011431_010 0.2284253062 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
14 Hb_000556_100 0.229060807 - - PREDICTED: uncharacterized protein LOC104784782 isoform X2 [Camelina sativa]
15 Hb_007007_050 0.2294594442 - - PREDICTED: ubiquitin-related modifier 1 homolog 2 [Malus domestica]
16 Hb_000684_300 0.2308033164 transcription factor TF Family: NF-YB hypothetical protein CICLE_v10012920mg [Citrus clementina]
17 Hb_002687_140 0.231834286 - - hypothetical protein JCGZ_24463 [Jatropha curcas]
18 Hb_001135_020 0.2339428797 - - PREDICTED: macrophage erythroblast attacher [Jatropha curcas]
19 Hb_002292_010 0.2342206207 - - hypothetical protein CICLE_v10029628mg [Citrus clementina]
20 Hb_008112_040 0.2346218752 - - PREDICTED: uncharacterized protein LOC105637336 [Jatropha curcas]

Gene co-expression network

sample Hb_018599_010 Hb_018599_010 Hb_000710_010 Hb_000710_010 Hb_018599_010--Hb_000710_010 Hb_031403_020 Hb_031403_020 Hb_018599_010--Hb_031403_020 Hb_007778_020 Hb_007778_020 Hb_018599_010--Hb_007778_020 Hb_014720_170 Hb_014720_170 Hb_018599_010--Hb_014720_170 Hb_001427_050 Hb_001427_050 Hb_018599_010--Hb_001427_050 Hb_002374_280 Hb_002374_280 Hb_018599_010--Hb_002374_280 Hb_021576_040 Hb_021576_040 Hb_000710_010--Hb_021576_040 Hb_002234_140 Hb_002234_140 Hb_000710_010--Hb_002234_140 Hb_000710_010--Hb_001427_050 Hb_008112_040 Hb_008112_040 Hb_000710_010--Hb_008112_040 Hb_003687_230 Hb_003687_230 Hb_000710_010--Hb_003687_230 Hb_000438_170 Hb_000438_170 Hb_000710_010--Hb_000438_170 Hb_006261_090 Hb_006261_090 Hb_031403_020--Hb_006261_090 Hb_031403_020--Hb_000710_010 Hb_031403_020--Hb_021576_040 Hb_002675_260 Hb_002675_260 Hb_031403_020--Hb_002675_260 Hb_000407_040 Hb_000407_040 Hb_031403_020--Hb_000407_040 Hb_002553_040 Hb_002553_040 Hb_031403_020--Hb_002553_040 Hb_000175_090 Hb_000175_090 Hb_007778_020--Hb_000175_090 Hb_000504_170 Hb_000504_170 Hb_007778_020--Hb_000504_170 Hb_000258_320 Hb_000258_320 Hb_007778_020--Hb_000258_320 Hb_007778_020--Hb_014720_170 Hb_007083_010 Hb_007083_010 Hb_007778_020--Hb_007083_010 Hb_003297_010 Hb_003297_010 Hb_007778_020--Hb_003297_010 Hb_014720_170--Hb_007083_010 Hb_001135_020 Hb_001135_020 Hb_014720_170--Hb_001135_020 Hb_001828_200 Hb_001828_200 Hb_014720_170--Hb_001828_200 Hb_002292_010 Hb_002292_010 Hb_014720_170--Hb_002292_010 Hb_002026_140 Hb_002026_140 Hb_014720_170--Hb_002026_140 Hb_014720_170--Hb_000504_170 Hb_001427_050--Hb_002292_010 Hb_001427_050--Hb_003687_230 Hb_007007_050 Hb_007007_050 Hb_001427_050--Hb_007007_050 Hb_002639_150 Hb_002639_150 Hb_001427_050--Hb_002639_150 Hb_003467_010 Hb_003467_010 Hb_001427_050--Hb_003467_010 Hb_000926_180 Hb_000926_180 Hb_001427_050--Hb_000926_180 Hb_000487_420 Hb_000487_420 Hb_002374_280--Hb_000487_420 Hb_000181_120 Hb_000181_120 Hb_002374_280--Hb_000181_120 Hb_004976_020 Hb_004976_020 Hb_002374_280--Hb_004976_020 Hb_000649_070 Hb_000649_070 Hb_002374_280--Hb_000649_070 Hb_028900_010 Hb_028900_010 Hb_002374_280--Hb_028900_010 Hb_012753_170 Hb_012753_170 Hb_002374_280--Hb_012753_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.82173 2.26115 1.99291 0.133471 2.51622 0.602888
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.54657 2.81094 0.133439 0.65315 0.590816

CAGE analysis