Hb_018609_010

Information

Type -
Description -
Location Contig18609: 1135-2802
Sequence    

Annotation

kegg
ID rcu:RCOM_1014130
description hypothetical protein
nr
ID XP_002522548.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S979
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1014130 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_018609_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001796_010 0.0622903431 - - purine transporter, putative [Ricinus communis]
3 Hb_186671_020 0.0736344973 - - ankyrin repeat-containing protein, putative [Ricinus communis]
4 Hb_005050_010 0.0844020445 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
5 Hb_099085_010 0.0846538712 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
6 Hb_000979_270 0.0869182752 - - PREDICTED: MLP-like protein 31 [Jatropha curcas]
7 Hb_064583_010 0.0908172552 - - PREDICTED: germin-like protein subfamily 1 member 7 [Vitis vinifera]
8 Hb_000004_150 0.0987340385 - - hypothetical protein RCOM_1382630 [Ricinus communis]
9 Hb_000007_170 0.0987340385 - - PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein [Nelumbo nucifera]
10 Hb_000010_280 0.0987340385 - - hypothetical protein JCGZ_13805 [Jatropha curcas]
11 Hb_000022_220 0.0987340385 - - PREDICTED: potassium channel KAT3 [Jatropha curcas]
12 Hb_000045_120 0.0987340385 - - hypothetical protein JCGZ_01307 [Jatropha curcas]
13 Hb_000056_320 0.0987340385 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
14 Hb_000066_110 0.0987340385 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01370 [Jatropha curcas]
15 Hb_000072_270 0.0987340385 - - JHL22C18.10 [Jatropha curcas]
16 Hb_000078_110 0.0987340385 - - PREDICTED: uncharacterized protein LOC105640496 [Jatropha curcas]
17 Hb_000081_190 0.0987340385 - - -
18 Hb_000082_030 0.0987340385 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105164525 [Sesamum indicum]
19 Hb_000085_430 0.0987340385 - - -
20 Hb_000092_110 0.0987340385 - - catalytic, putative [Ricinus communis]

Gene co-expression network

sample Hb_018609_010 Hb_018609_010 Hb_001796_010 Hb_001796_010 Hb_018609_010--Hb_001796_010 Hb_186671_020 Hb_186671_020 Hb_018609_010--Hb_186671_020 Hb_005050_010 Hb_005050_010 Hb_018609_010--Hb_005050_010 Hb_099085_010 Hb_099085_010 Hb_018609_010--Hb_099085_010 Hb_000979_270 Hb_000979_270 Hb_018609_010--Hb_000979_270 Hb_064583_010 Hb_064583_010 Hb_018609_010--Hb_064583_010 Hb_001796_010--Hb_186671_020 Hb_001796_010--Hb_099085_010 Hb_001796_010--Hb_064583_010 Hb_011980_020 Hb_011980_020 Hb_001796_010--Hb_011980_020 Hb_163950_060 Hb_163950_060 Hb_001796_010--Hb_163950_060 Hb_186671_020--Hb_163950_060 Hb_186671_020--Hb_005050_010 Hb_000395_160 Hb_000395_160 Hb_186671_020--Hb_000395_160 Hb_186671_020--Hb_000979_270 Hb_005050_010--Hb_000979_270 Hb_005050_010--Hb_099085_010 Hb_000004_150 Hb_000004_150 Hb_005050_010--Hb_000004_150 Hb_000007_170 Hb_000007_170 Hb_005050_010--Hb_000007_170 Hb_000010_280 Hb_000010_280 Hb_005050_010--Hb_000010_280 Hb_000022_220 Hb_000022_220 Hb_005050_010--Hb_000022_220 Hb_099085_010--Hb_064583_010 Hb_000563_370 Hb_000563_370 Hb_099085_010--Hb_000563_370 Hb_007328_020 Hb_007328_020 Hb_099085_010--Hb_007328_020 Hb_000215_380 Hb_000215_380 Hb_099085_010--Hb_000215_380 Hb_007264_050 Hb_007264_050 Hb_099085_010--Hb_007264_050 Hb_000979_270--Hb_000004_150 Hb_000979_270--Hb_000007_170 Hb_000979_270--Hb_000010_280 Hb_000979_270--Hb_000022_220 Hb_000045_120 Hb_000045_120 Hb_000979_270--Hb_000045_120 Hb_064583_010--Hb_000563_370 Hb_064583_010--Hb_007328_020 Hb_064583_010--Hb_000215_380 Hb_044724_020 Hb_044724_020 Hb_064583_010--Hb_044724_020 Hb_064583_010--Hb_007264_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 10.1577 0 0.0624273 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0276622 0 0.0410459 0.0694033 0

CAGE analysis