Hb_019064_010

Information

Type -
Description -
Location Contig19064: 8888-10458
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_019064_010 0.0 - - -
2 Hb_009663_030 0.0667836383 - - Blue copper protein precursor, putative [Ricinus communis]
3 Hb_000037_090 0.0674318468 - - Na(+)/H(+) antiporter, putative [Ricinus communis]
4 Hb_000692_200 0.0677319207 - - PREDICTED: thioredoxin-like protein CDSP32, chloroplastic [Jatropha curcas]
5 Hb_011628_050 0.0759015504 - - PREDICTED: monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic isoform X1 [Jatropha curcas]
6 Hb_003436_040 0.0768226712 - - monovalent cation:proton antiporter, putative [Ricinus communis]
7 Hb_001038_040 0.0788107151 - - -
8 Hb_000326_110 0.0820706496 - - PREDICTED: uncharacterized protein LOC105632350 [Jatropha curcas]
9 Hb_001671_130 0.0845662823 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Jatropha curcas]
10 Hb_001210_110 0.0908332482 - - PREDICTED: gibberellin 3-beta-dioxygenase 1 [Jatropha curcas]
11 Hb_000134_240 0.0913887616 - - cytochrome P450, putative [Ricinus communis]
12 Hb_028227_050 0.1024235293 - - PREDICTED: glucuronoxylan 4-O-methyltransferase 1 [Jatropha curcas]
13 Hb_004611_010 0.1026235201 - - Blue copper protein precursor, putative [Ricinus communis]
14 Hb_005656_220 0.1028357265 - - PREDICTED: uncharacterized protein LOC105109832 [Populus euphratica]
15 Hb_001357_320 0.1042475687 - - GRP3S, putative [Ricinus communis]
16 Hb_124016_010 0.1042667839 - - hypothetical protein POPTR_0008s21806g [Populus trichocarpa]
17 Hb_081874_010 0.1043763043 - - PREDICTED: uncharacterized protein LOC102581051 [Solanum tuberosum]
18 Hb_001761_090 0.1043865769 - - Protein STRUBBELIG-RECEPTOR FAMILY 5 [Glycine soja]
19 Hb_005305_180 0.1045498586 transcription factor TF Family: NAC PREDICTED: NAC transcription factor ONAC010-like [Gossypium raimondii]
20 Hb_058242_010 0.1046317762 - - PREDICTED: uncharacterized protein LOC105793478 [Gossypium raimondii]

Gene co-expression network

sample Hb_019064_010 Hb_019064_010 Hb_009663_030 Hb_009663_030 Hb_019064_010--Hb_009663_030 Hb_000037_090 Hb_000037_090 Hb_019064_010--Hb_000037_090 Hb_000692_200 Hb_000692_200 Hb_019064_010--Hb_000692_200 Hb_011628_050 Hb_011628_050 Hb_019064_010--Hb_011628_050 Hb_003436_040 Hb_003436_040 Hb_019064_010--Hb_003436_040 Hb_001038_040 Hb_001038_040 Hb_019064_010--Hb_001038_040 Hb_009663_030--Hb_003436_040 Hb_003337_080 Hb_003337_080 Hb_009663_030--Hb_003337_080 Hb_004611_010 Hb_004611_010 Hb_009663_030--Hb_004611_010 Hb_001671_130 Hb_001671_130 Hb_009663_030--Hb_001671_130 Hb_009663_030--Hb_000692_200 Hb_008725_280 Hb_008725_280 Hb_009663_030--Hb_008725_280 Hb_000037_090--Hb_009663_030 Hb_000037_090--Hb_003436_040 Hb_000326_110 Hb_000326_110 Hb_000037_090--Hb_000326_110 Hb_000037_090--Hb_003337_080 Hb_000010_380 Hb_000010_380 Hb_000037_090--Hb_000010_380 Hb_000692_200--Hb_003436_040 Hb_000692_200--Hb_001038_040 Hb_000692_200--Hb_011628_050 Hb_000692_200--Hb_004611_010 Hb_011628_050--Hb_001038_040 Hb_011628_050--Hb_000326_110 Hb_011628_050--Hb_003436_040 Hb_000134_240 Hb_000134_240 Hb_011628_050--Hb_000134_240 Hb_005656_220 Hb_005656_220 Hb_011628_050--Hb_005656_220 Hb_003436_040--Hb_004611_010 Hb_003436_040--Hb_001038_040 Hb_027403_010 Hb_027403_010 Hb_003436_040--Hb_027403_010 Hb_001038_040--Hb_005656_220 Hb_001038_040--Hb_004611_010 Hb_002161_010 Hb_002161_010 Hb_001038_040--Hb_002161_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0818418 1.5816 0.0848215 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0100888 6.44213

CAGE analysis