Hb_019280_020

Information

Type -
Description -
Location Contig19280: 14732-19044
Sequence    

Annotation

kegg
ID pop:POPTR_0007s04490g
description POPTRDRAFT_217237; hypothetical protein
nr
ID XP_012092537.1
description PREDICTED: proline-rich receptor-like protein kinase PERK14 isoform X1 [Jatropha curcas]
swissprot
ID Q9LV48
description Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana GN=PERK1 PE=2 SV=1
trembl
ID A0A067JKC5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05332 PE=3 SV=1
Gene Ontology
ID GO:0004672
description kinase protein with adenine nucleotide alpha hydrolases-like isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19202: 14866-18976
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_019280_020 0.0 - - PREDICTED: proline-rich receptor-like protein kinase PERK14 isoform X1 [Jatropha curcas]
2 Hb_012362_030 0.0825320428 - - PREDICTED: GPI-anchored protein LORELEI-like [Populus euphratica]
3 Hb_001481_150 0.0894064276 - - hypothetical protein POPTR_0001s15440g [Populus trichocarpa]
4 Hb_000152_710 0.1037445983 - - PREDICTED: putative glycerol-3-phosphate transporter 1 [Jatropha curcas]
5 Hb_029510_100 0.1066097505 - - scab resistance family protein [Populus trichocarpa]
6 Hb_033152_070 0.1080385175 - - N-acetyl-gamma-glutamyl-phosphate reductase, putative [Ricinus communis]
7 Hb_004525_040 0.1081951674 - - PREDICTED: sugar transporter ERD6-like 6 [Jatropha curcas]
8 Hb_006683_020 0.1087625926 - - PREDICTED: nucleosome assembly protein 1;4 [Jatropha curcas]
9 Hb_021576_070 0.109317274 - - hypothetical protein PRUPE_ppa002736mg [Prunus persica]
10 Hb_006469_070 0.1100980536 - - PREDICTED: F-box/kelch-repeat protein At1g22040 [Jatropha curcas]
11 Hb_000009_060 0.1111485493 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B [Jatropha curcas]
12 Hb_010042_020 0.1113202279 - - UDP-n-acteylglucosamine pyrophosphorylase, putative [Ricinus communis]
13 Hb_001021_010 0.1130527915 - - PREDICTED: bifunctional protein FolD 2 [Jatropha curcas]
14 Hb_004109_050 0.1136760313 - - PREDICTED: putative callose synthase 8 [Jatropha curcas]
15 Hb_000023_300 0.1145708361 - - Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
16 Hb_000062_530 0.1166915932 - - PREDICTED: GDP-mannose transporter GONST3-like [Populus euphratica]
17 Hb_000679_100 0.1192988105 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g25400 isoform X1 [Jatropha curcas]
18 Hb_007416_070 0.1219376517 transcription factor TF Family: B3 hypothetical protein JCGZ_07038 [Jatropha curcas]
19 Hb_001097_040 0.1228471311 - - PREDICTED: probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B [Jatropha curcas]
20 Hb_147245_010 0.1240093732 - - casein kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_019280_020 Hb_019280_020 Hb_012362_030 Hb_012362_030 Hb_019280_020--Hb_012362_030 Hb_001481_150 Hb_001481_150 Hb_019280_020--Hb_001481_150 Hb_000152_710 Hb_000152_710 Hb_019280_020--Hb_000152_710 Hb_029510_100 Hb_029510_100 Hb_019280_020--Hb_029510_100 Hb_033152_070 Hb_033152_070 Hb_019280_020--Hb_033152_070 Hb_004525_040 Hb_004525_040 Hb_019280_020--Hb_004525_040 Hb_000062_530 Hb_000062_530 Hb_012362_030--Hb_000062_530 Hb_000062_090 Hb_000062_090 Hb_012362_030--Hb_000062_090 Hb_012362_030--Hb_029510_100 Hb_147245_010 Hb_147245_010 Hb_012362_030--Hb_147245_010 Hb_000008_190 Hb_000008_190 Hb_012362_030--Hb_000008_190 Hb_004480_020 Hb_004480_020 Hb_001481_150--Hb_004480_020 Hb_000928_190 Hb_000928_190 Hb_001481_150--Hb_000928_190 Hb_001481_150--Hb_033152_070 Hb_001481_150--Hb_004525_040 Hb_001006_270 Hb_001006_270 Hb_001481_150--Hb_001006_270 Hb_021576_070 Hb_021576_070 Hb_000152_710--Hb_021576_070 Hb_004109_050 Hb_004109_050 Hb_000152_710--Hb_004109_050 Hb_007537_030 Hb_007537_030 Hb_000152_710--Hb_007537_030 Hb_001545_130 Hb_001545_130 Hb_000152_710--Hb_001545_130 Hb_000494_030 Hb_000494_030 Hb_000152_710--Hb_000494_030 Hb_001014_190 Hb_001014_190 Hb_029510_100--Hb_001014_190 Hb_004330_080 Hb_004330_080 Hb_029510_100--Hb_004330_080 Hb_004094_020 Hb_004094_020 Hb_029510_100--Hb_004094_020 Hb_000120_230 Hb_000120_230 Hb_029510_100--Hb_000120_230 Hb_010042_020 Hb_010042_020 Hb_033152_070--Hb_010042_020 Hb_003207_020 Hb_003207_020 Hb_033152_070--Hb_003207_020 Hb_033152_070--Hb_000928_190 Hb_033152_070--Hb_004525_040 Hb_003052_180 Hb_003052_180 Hb_033152_070--Hb_003052_180 Hb_000402_130 Hb_000402_130 Hb_033152_070--Hb_000402_130 Hb_000389_030 Hb_000389_030 Hb_004525_040--Hb_000389_030 Hb_001021_010 Hb_001021_010 Hb_004525_040--Hb_001021_010 Hb_000256_230 Hb_000256_230 Hb_004525_040--Hb_000256_230 Hb_004126_040 Hb_004126_040 Hb_004525_040--Hb_004126_040 Hb_004525_040--Hb_010042_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.37155 7.43961 6.80332 24.9172 2.59686 3.37693
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.53599 3.53924 6.1375 11.0707 6.90603

CAGE analysis