Hb_019654_050

Information

Type -
Description -
Location Contig19654: 26671-31625
Sequence    

Annotation

kegg
ID pop:POPTR_0002s01540g
description POPTRDRAFT_815978; prolyl oligopeptidase family protein
nr
ID XP_012073700.1
description PREDICTED: prolyl endopeptidase [Jatropha curcas]
swissprot
ID P48147
description Prolyl endopeptidase OS=Homo sapiens GN=PREP PE=1 SV=2
trembl
ID A0A067KL52
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08143 PE=4 SV=1
Gene Ontology
ID GO:0004252
description prolyl oligopeptidase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19701: 27306-27406 , PASA_asmbl_19703: 28170-28392 , PASA_asmbl_19704: 28212-28753 , PASA_asmbl_19705: 30734-31019
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_019654_050 0.0 - - PREDICTED: prolyl endopeptidase [Jatropha curcas]
2 Hb_001799_160 0.0872686721 - - PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X2 [Jatropha curcas]
3 Hb_000120_890 0.0944127987 - - PREDICTED: phosphoinositide phosphatase SAC6 [Jatropha curcas]
4 Hb_003835_110 0.0985517118 - - PREDICTED: nucleobase-ascorbate transporter 11 isoform X1 [Jatropha curcas]
5 Hb_003498_100 0.0992012428 - - component of oligomeric golgi complex, putative [Ricinus communis]
6 Hb_011381_040 0.104293426 - - PREDICTED: uncharacterized protein At1g32220, chloroplastic [Jatropha curcas]
7 Hb_002783_220 0.1122780061 - - PREDICTED: uncharacterized protein LOC105635342 isoform X1 [Jatropha curcas]
8 Hb_000260_460 0.1161595467 - - Ethanolamine-phosphate cytidylyltransferase, putative [Ricinus communis]
9 Hb_002205_140 0.1175804092 transcription factor TF Family: bZIP PREDICTED: transcription factor RF2b [Jatropha curcas]
10 Hb_000364_170 0.1196171941 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase CLF [Jatropha curcas]
11 Hb_002871_040 0.1203312118 - - PREDICTED: enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic-like [Populus euphratica]
12 Hb_001279_190 0.1204755362 - - PREDICTED: uncharacterized membrane protein At3g27390 isoform X1 [Jatropha curcas]
13 Hb_000579_080 0.1207530381 - - PREDICTED: 26S protease regulatory subunit S10B homolog B [Jatropha curcas]
14 Hb_007483_070 0.1221702535 - - PREDICTED: intersectin-1 isoform X1 [Populus euphratica]
15 Hb_004228_120 0.1227371167 - - hypothetical protein POPTR_0013s02080g [Populus trichocarpa]
16 Hb_001703_040 0.1230414384 - - PREDICTED: uncharacterized protein At1g04910 isoform X2 [Jatropha curcas]
17 Hb_089839_010 0.1230553051 - - PREDICTED: probable xyloglucan glycosyltransferase 6 [Jatropha curcas]
18 Hb_011716_010 0.123838048 - - PREDICTED: probable protein arginine N-methyltransferase 1.2 [Jatropha curcas]
19 Hb_000163_260 0.1248555121 - - PREDICTED: uncharacterized protein LOC105642518 [Jatropha curcas]
20 Hb_018790_020 0.1252701268 - - protein kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_019654_050 Hb_019654_050 Hb_001799_160 Hb_001799_160 Hb_019654_050--Hb_001799_160 Hb_000120_890 Hb_000120_890 Hb_019654_050--Hb_000120_890 Hb_003835_110 Hb_003835_110 Hb_019654_050--Hb_003835_110 Hb_003498_100 Hb_003498_100 Hb_019654_050--Hb_003498_100 Hb_011381_040 Hb_011381_040 Hb_019654_050--Hb_011381_040 Hb_002783_220 Hb_002783_220 Hb_019654_050--Hb_002783_220 Hb_000318_220 Hb_000318_220 Hb_001799_160--Hb_000318_220 Hb_001799_160--Hb_003498_100 Hb_001799_160--Hb_000120_890 Hb_001504_010 Hb_001504_010 Hb_001799_160--Hb_001504_010 Hb_007483_070 Hb_007483_070 Hb_001799_160--Hb_007483_070 Hb_001053_190 Hb_001053_190 Hb_001799_160--Hb_001053_190 Hb_000120_890--Hb_003498_100 Hb_000476_060 Hb_000476_060 Hb_000120_890--Hb_000476_060 Hb_000120_890--Hb_001504_010 Hb_178968_060 Hb_178968_060 Hb_000120_890--Hb_178968_060 Hb_008304_020 Hb_008304_020 Hb_000120_890--Hb_008304_020 Hb_018790_020 Hb_018790_020 Hb_000120_890--Hb_018790_020 Hb_003835_110--Hb_011381_040 Hb_002871_040 Hb_002871_040 Hb_003835_110--Hb_002871_040 Hb_002027_320 Hb_002027_320 Hb_003835_110--Hb_002027_320 Hb_006588_190 Hb_006588_190 Hb_003835_110--Hb_006588_190 Hb_017193_010 Hb_017193_010 Hb_003835_110--Hb_017193_010 Hb_003498_100--Hb_178968_060 Hb_089839_010 Hb_089839_010 Hb_003498_100--Hb_089839_010 Hb_001279_190 Hb_001279_190 Hb_003498_100--Hb_001279_190 Hb_000703_190 Hb_000703_190 Hb_003498_100--Hb_000703_190 Hb_011381_040--Hb_006588_190 Hb_000364_170 Hb_000364_170 Hb_011381_040--Hb_000364_170 Hb_011381_040--Hb_002871_040 Hb_000029_400 Hb_000029_400 Hb_011381_040--Hb_000029_400 Hb_011381_040--Hb_002027_320 Hb_006775_120 Hb_006775_120 Hb_002783_220--Hb_006775_120 Hb_002783_220--Hb_000364_170 Hb_000000_330 Hb_000000_330 Hb_002783_220--Hb_000000_330 Hb_005333_060 Hb_005333_060 Hb_002783_220--Hb_005333_060 Hb_000987_040 Hb_000987_040 Hb_002783_220--Hb_000987_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.12383 5.05283 21.391 12.798 6.62979 2.98305
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.40048 7.02734 7.19028 7.03782 7.40986

CAGE analysis