Hb_019654_120

Information

Type -
Description -
Location Contig19654: 88306-88800
Sequence    

Annotation

kegg
ID rcu:RCOM_1599820
description hypothetical protein
nr
ID XP_012073707.1
description PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Jatropha curcas]
swissprot
ID Q5CZL1
description Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis PE=2 SV=1
trembl
ID A0A067KYD2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08150 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_019654_120 0.0 - - PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Jatropha curcas]
2 Hb_178389_010 0.2067520799 - - PREDICTED: U-box domain-containing protein 15-like isoform X2 [Jatropha curcas]
3 Hb_122567_010 0.2310418079 - - -
4 Hb_123104_010 0.2426694301 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
5 Hb_000395_100 0.2582052712 - - Protein MYG1, putative [Ricinus communis]
6 Hb_017111_010 0.2736742554 - - PREDICTED: inositol transporter 4 [Jatropha curcas]
7 Hb_007467_020 0.274317388 - - -
8 Hb_011909_090 0.2760052943 transcription factor TF Family: NOZZLE PREDICTED: uncharacterized protein LOC105633212 [Jatropha curcas]
9 Hb_002007_290 0.2761493277 - - -
10 Hb_002498_200 0.2874322178 transcription factor TF Family: G2-like PREDICTED: putative Myb family transcription factor At1g14600 [Jatropha curcas]
11 Hb_049014_010 0.2909955106 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
12 Hb_000656_130 0.2936388237 - - hypothetical protein PRUPE_ppa026157mg, partial [Prunus persica]
13 Hb_001676_030 0.294693161 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
14 Hb_000454_020 0.2947230747 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
15 Hb_142068_020 0.2949282149 - - PREDICTED: thylakoidal processing peptidase 1, chloroplastic-like [Jatropha curcas]
16 Hb_075481_010 0.2956449707 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
17 Hb_001313_010 0.2974805572 - - polyprotein [Ananas comosus]
18 Hb_005539_300 0.298780593 - - PREDICTED: deacetoxyvindoline 4-hydroxylase-like [Populus euphratica]
19 Hb_007382_040 0.299911922 - - uncharacterized LOC105644857 [Jatropha curcas]
20 Hb_001230_010 0.3001531547 - - -

Gene co-expression network

sample Hb_019654_120 Hb_019654_120 Hb_178389_010 Hb_178389_010 Hb_019654_120--Hb_178389_010 Hb_122567_010 Hb_122567_010 Hb_019654_120--Hb_122567_010 Hb_123104_010 Hb_123104_010 Hb_019654_120--Hb_123104_010 Hb_000395_100 Hb_000395_100 Hb_019654_120--Hb_000395_100 Hb_017111_010 Hb_017111_010 Hb_019654_120--Hb_017111_010 Hb_007467_020 Hb_007467_020 Hb_019654_120--Hb_007467_020 Hb_178389_010--Hb_122567_010 Hb_000656_130 Hb_000656_130 Hb_178389_010--Hb_000656_130 Hb_000454_020 Hb_000454_020 Hb_178389_010--Hb_000454_020 Hb_142068_020 Hb_142068_020 Hb_178389_010--Hb_142068_020 Hb_001676_030 Hb_001676_030 Hb_178389_010--Hb_001676_030 Hb_049014_010 Hb_049014_010 Hb_122567_010--Hb_049014_010 Hb_122567_010--Hb_000656_130 Hb_075481_010 Hb_075481_010 Hb_122567_010--Hb_075481_010 Hb_122567_010--Hb_000454_020 Hb_122567_010--Hb_142068_020 Hb_000186_100 Hb_000186_100 Hb_123104_010--Hb_000186_100 Hb_000313_320 Hb_000313_320 Hb_123104_010--Hb_000313_320 Hb_002307_050 Hb_002307_050 Hb_123104_010--Hb_002307_050 Hb_123104_010--Hb_017111_010 Hb_000101_180 Hb_000101_180 Hb_123104_010--Hb_000101_180 Hb_002007_290 Hb_002007_290 Hb_123104_010--Hb_002007_290 Hb_158990_010 Hb_158990_010 Hb_000395_100--Hb_158990_010 Hb_001178_120 Hb_001178_120 Hb_000395_100--Hb_001178_120 Hb_004466_010 Hb_004466_010 Hb_000395_100--Hb_004466_010 Hb_000094_390 Hb_000094_390 Hb_000395_100--Hb_000094_390 Hb_011639_070 Hb_011639_070 Hb_000395_100--Hb_011639_070 Hb_017111_010--Hb_000186_100 Hb_000523_020 Hb_000523_020 Hb_017111_010--Hb_000523_020 Hb_002388_060 Hb_002388_060 Hb_017111_010--Hb_002388_060 Hb_003687_200 Hb_003687_200 Hb_017111_010--Hb_003687_200 Hb_007545_210 Hb_007545_210 Hb_017111_010--Hb_007545_210 Hb_126669_010 Hb_126669_010 Hb_017111_010--Hb_126669_010 Hb_001313_010 Hb_001313_010 Hb_007467_020--Hb_001313_010 Hb_007467_020--Hb_178389_010 Hb_007467_020--Hb_000656_130 Hb_007467_020--Hb_000454_020 Hb_007467_020--Hb_142068_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.96784 0.082377 0 0 0.676942 1.74612
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.368416 0.144686 0 0.553786 0

CAGE analysis