Hb_019837_040

Information

Type -
Description -
Location Contig19837: 23076-25322
Sequence    

Annotation

kegg
ID rcu:RCOM_0649410
description hypothetical protein
nr
ID XP_012076246.1
description PREDICTED: histone-lysine N-methyltransferase SETD1B [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LF51
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15297 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_019837_040 0.0 - - PREDICTED: histone-lysine N-methyltransferase SETD1B [Jatropha curcas]
2 Hb_000105_100 0.1434609763 - - PREDICTED: pyruvate kinase isozyme A, chloroplastic-like [Jatropha curcas]
3 Hb_169116_010 0.1445150122 - - PREDICTED: fatty-acid-binding protein 1 [Jatropha curcas]
4 Hb_004689_040 0.1607272526 - - PREDICTED: uncharacterized protein LOC105648084 [Jatropha curcas]
5 Hb_003641_030 0.1644770247 - - PREDICTED: uncharacterized protein LOC105638015 [Jatropha curcas]
6 Hb_009178_070 0.1730713432 - - PREDICTED: probable plastid-lipid-associated protein 8, chloroplastic [Jatropha curcas]
7 Hb_001488_030 0.1834071809 - - biotin carboxyl carrier protein [Vernicia fordii]
8 Hb_003209_010 0.1841510356 - - hypothetical protein POPTR_0010s16880g [Populus trichocarpa]
9 Hb_000120_990 0.1876294245 - - PREDICTED: MATE efflux family protein 3, chloroplastic-like [Jatropha curcas]
10 Hb_000922_340 0.1894453947 - - PREDICTED: uncharacterized protein LOC105640368 [Jatropha curcas]
11 Hb_002836_120 0.1958574294 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060 isoform X1 [Populus euphratica]
12 Hb_010812_100 0.1971588581 - - phosphate transporter [Manihot esculenta]
13 Hb_004672_030 0.1985346366 - - proline oxidase [Manihot esculenta]
14 Hb_000005_180 0.1987260137 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000442_040 0.1998204436 - - PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic [Jatropha curcas]
16 Hb_000049_110 0.2019197809 - - PREDICTED: subtilisin-like protease SBT1.2 [Jatropha curcas]
17 Hb_000676_020 0.2039895235 - - PREDICTED: uncharacterized protein LOC105645386 [Jatropha curcas]
18 Hb_017895_060 0.2046765291 - - PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic [Jatropha curcas]
19 Hb_007110_010 0.2053158627 - - PREDICTED: accessory gland protein Acp36DE [Jatropha curcas]
20 Hb_001124_190 0.2086655839 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_019837_040 Hb_019837_040 Hb_000105_100 Hb_000105_100 Hb_019837_040--Hb_000105_100 Hb_169116_010 Hb_169116_010 Hb_019837_040--Hb_169116_010 Hb_004689_040 Hb_004689_040 Hb_019837_040--Hb_004689_040 Hb_003641_030 Hb_003641_030 Hb_019837_040--Hb_003641_030 Hb_009178_070 Hb_009178_070 Hb_019837_040--Hb_009178_070 Hb_001488_030 Hb_001488_030 Hb_019837_040--Hb_001488_030 Hb_000105_100--Hb_003641_030 Hb_000105_100--Hb_169116_010 Hb_000442_040 Hb_000442_040 Hb_000105_100--Hb_000442_040 Hb_003209_010 Hb_003209_010 Hb_000105_100--Hb_003209_010 Hb_000120_990 Hb_000120_990 Hb_000105_100--Hb_000120_990 Hb_169116_010--Hb_001488_030 Hb_000005_180 Hb_000005_180 Hb_169116_010--Hb_000005_180 Hb_169116_010--Hb_000442_040 Hb_009851_010 Hb_009851_010 Hb_169116_010--Hb_009851_010 Hb_017895_060 Hb_017895_060 Hb_004689_040--Hb_017895_060 Hb_000991_020 Hb_000991_020 Hb_004689_040--Hb_000991_020 Hb_001405_090 Hb_001405_090 Hb_004689_040--Hb_001405_090 Hb_169209_010 Hb_169209_010 Hb_004689_040--Hb_169209_010 Hb_004689_040--Hb_009178_070 Hb_003641_030--Hb_000120_990 Hb_014361_030 Hb_014361_030 Hb_003641_030--Hb_014361_030 Hb_000390_190 Hb_000390_190 Hb_003641_030--Hb_000390_190 Hb_024468_030 Hb_024468_030 Hb_003641_030--Hb_024468_030 Hb_002150_130 Hb_002150_130 Hb_009178_070--Hb_002150_130 Hb_088500_010 Hb_088500_010 Hb_009178_070--Hb_088500_010 Hb_001124_190 Hb_001124_190 Hb_009178_070--Hb_001124_190 Hb_009178_070--Hb_003209_010 Hb_005914_050 Hb_005914_050 Hb_009178_070--Hb_005914_050 Hb_000922_340 Hb_000922_340 Hb_009178_070--Hb_000922_340 Hb_000122_190 Hb_000122_190 Hb_001488_030--Hb_000122_190 Hb_001488_030--Hb_000005_180 Hb_000035_240 Hb_000035_240 Hb_001488_030--Hb_000035_240 Hb_001541_110 Hb_001541_110 Hb_001488_030--Hb_001541_110 Hb_000049_110 Hb_000049_110 Hb_001488_030--Hb_000049_110 Hb_001587_180 Hb_001587_180 Hb_001488_030--Hb_001587_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.32892 0.972169 12.0628 8.66655 0.205468 0.570509
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.55018 3.79528 4.27744 0.515204 11.1261

CAGE analysis