Hb_019871_020

Information

Type -
Description -
Location Contig19871: 12468-16155
Sequence    

Annotation

kegg
ID rcu:RCOM_0617850
description hypothetical protein
nr
ID XP_012082117.1
description PREDICTED: uncharacterized protein LOC105642047 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KAZ4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18356 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_019871_020 0.0 - - PREDICTED: uncharacterized protein LOC105642047 [Jatropha curcas]
2 Hb_000608_340 0.0737446491 - - PREDICTED: putative RNA-binding protein Luc7-like 2 [Populus euphratica]
3 Hb_001582_030 0.0820544085 - - PREDICTED: uncharacterized protein LOC105639462 [Jatropha curcas]
4 Hb_006173_020 0.0851755507 - - PREDICTED: uncharacterized protein At2g39795, mitochondrial-like [Jatropha curcas]
5 Hb_004531_090 0.0862843744 - - PREDICTED: VHS domain-containing protein At3g16270 [Jatropha curcas]
6 Hb_000185_090 0.0871645581 desease resistance Gene Name: CDC48_N PREDICTED: cell division cycle protein 48 homolog [Jatropha curcas]
7 Hb_000940_040 0.0881145314 - - PREDICTED: protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Jatropha curcas]
8 Hb_000779_040 0.0905544991 - - PREDICTED: protein FLX-like 4 [Jatropha curcas]
9 Hb_001016_060 0.0914286303 - - conserved hypothetical protein [Ricinus communis]
10 Hb_007111_040 0.0917069076 - - PREDICTED: uncharacterized protein LOC105628142 isoform X1 [Jatropha curcas]
11 Hb_007534_040 0.0924721243 - - PREDICTED: uncharacterized protein LOC105635538 [Jatropha curcas]
12 Hb_113216_010 0.092672749 - - PREDICTED: calcium-dependent protein kinase 26-like [Jatropha curcas]
13 Hb_174865_050 0.0931922313 - - PREDICTED: neuroguidin [Jatropha curcas]
14 Hb_009615_110 0.0951523944 - - PREDICTED: PAX3- and PAX7-binding protein 1 [Jatropha curcas]
15 Hb_000212_280 0.0958966201 - - PREDICTED: putative RNA-binding protein Luc7-like 2 [Gossypium raimondii]
16 Hb_007441_070 0.0967222523 - - hypothetical protein PRUPE_ppa004494mg [Prunus persica]
17 Hb_000291_120 0.0978397493 transcription factor TF Family: ARF PREDICTED: auxin response factor 17 [Jatropha curcas]
18 Hb_000392_280 0.0981540325 - - PREDICTED: pectinesterase 3 [Jatropha curcas]
19 Hb_003666_050 0.0984793804 - - PREDICTED: NASP-related protein sim3 [Jatropha curcas]
20 Hb_000035_400 0.09848379 - - PREDICTED: lariat debranching enzyme-like [Citrus sinensis]

Gene co-expression network

sample Hb_019871_020 Hb_019871_020 Hb_000608_340 Hb_000608_340 Hb_019871_020--Hb_000608_340 Hb_001582_030 Hb_001582_030 Hb_019871_020--Hb_001582_030 Hb_006173_020 Hb_006173_020 Hb_019871_020--Hb_006173_020 Hb_004531_090 Hb_004531_090 Hb_019871_020--Hb_004531_090 Hb_000185_090 Hb_000185_090 Hb_019871_020--Hb_000185_090 Hb_000940_040 Hb_000940_040 Hb_019871_020--Hb_000940_040 Hb_000779_040 Hb_000779_040 Hb_000608_340--Hb_000779_040 Hb_002374_150 Hb_002374_150 Hb_000608_340--Hb_002374_150 Hb_003666_050 Hb_003666_050 Hb_000608_340--Hb_003666_050 Hb_000619_070 Hb_000619_070 Hb_000608_340--Hb_000619_070 Hb_035360_010 Hb_035360_010 Hb_000608_340--Hb_035360_010 Hb_005000_270 Hb_005000_270 Hb_001582_030--Hb_005000_270 Hb_000212_280 Hb_000212_280 Hb_001582_030--Hb_000212_280 Hb_000134_360 Hb_000134_360 Hb_001582_030--Hb_000134_360 Hb_008528_010 Hb_008528_010 Hb_001582_030--Hb_008528_010 Hb_000732_020 Hb_000732_020 Hb_001582_030--Hb_000732_020 Hb_001016_060 Hb_001016_060 Hb_006173_020--Hb_001016_060 Hb_005016_030 Hb_005016_030 Hb_006173_020--Hb_005016_030 Hb_009615_110 Hb_009615_110 Hb_006173_020--Hb_009615_110 Hb_000320_440 Hb_000320_440 Hb_006173_020--Hb_000320_440 Hb_000270_450 Hb_000270_450 Hb_006173_020--Hb_000270_450 Hb_004531_090--Hb_000779_040 Hb_002025_140 Hb_002025_140 Hb_004531_090--Hb_002025_140 Hb_000291_120 Hb_000291_120 Hb_004531_090--Hb_000291_120 Hb_000211_090 Hb_000211_090 Hb_004531_090--Hb_000211_090 Hb_000573_040 Hb_000573_040 Hb_004531_090--Hb_000573_040 Hb_001034_020 Hb_001034_020 Hb_004531_090--Hb_001034_020 Hb_113216_010 Hb_113216_010 Hb_000185_090--Hb_113216_010 Hb_000185_090--Hb_000211_090 Hb_000185_090--Hb_003666_050 Hb_000185_090--Hb_000779_040 Hb_000016_180 Hb_000016_180 Hb_000185_090--Hb_000016_180 Hb_007441_070 Hb_007441_070 Hb_000940_040--Hb_007441_070 Hb_011644_020 Hb_011644_020 Hb_000940_040--Hb_011644_020 Hb_004656_060 Hb_004656_060 Hb_000940_040--Hb_004656_060 Hb_000270_140 Hb_000270_140 Hb_000940_040--Hb_000270_140 Hb_000940_040--Hb_000608_340
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
152.158 50.6218 24.0321 15.6027 240.531 223.673
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
59.6276 48.4339 40.7442 29.2263 16.5327

CAGE analysis