Hb_019925_010

Information

Type -
Description -
Location Contig19925: 42289-42591
Sequence    

Annotation

kegg
ID cit:102625546
description long-chain-alcohol oxidase FAO4A-like
nr
ID XP_012072679.1
description PREDICTED: long-chain-alcohol oxidase FAO4A-like [Jatropha curcas]
swissprot
ID O65709
description Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana GN=FAO4A PE=3 SV=2
trembl
ID A0A067KNM1
description Long-chain-alcohol oxidase OS=Jatropha curcas GN=JCGZ_06718 PE=3 SV=1
Gene Ontology
ID GO:0016614
description long-chain-alcohol oxidase fao4a-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_019925_010 0.0 - - PREDICTED: long-chain-alcohol oxidase FAO4A-like [Jatropha curcas]
2 Hb_001221_250 0.0721146039 - - -
3 Hb_125181_010 0.0954450667 - - PREDICTED: uncharacterized protein LOC104115096 [Nicotiana tomentosiformis]
4 Hb_000090_010 0.1175650132 - - hypothetical protein JCGZ_22567 [Jatropha curcas]
5 Hb_001478_030 0.1230251672 - - conserved hypothetical protein [Ricinus communis]
6 Hb_006483_020 0.1234925684 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like isoform X1 [Jatropha curcas]
7 Hb_101705_040 0.1309525691 - - cytochrome P450, putative [Ricinus communis]
8 Hb_028818_020 0.1332752758 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9-like [Jatropha curcas]
9 Hb_044380_010 0.1392282374 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Malus domestica]
10 Hb_004994_230 0.1408966993 transcription factor TF Family: LIM Pollen-specific protein SF3, putative [Ricinus communis]
11 Hb_034507_030 0.1419121295 - - PREDICTED: laccase-4-like [Jatropha curcas]
12 Hb_000193_090 0.142024844 - - cysteine protease, putative [Ricinus communis]
13 Hb_004117_230 0.1432482004 - - lipid transfer precursor protein [Hevea brasiliensis]
14 Hb_005827_020 0.144721816 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 [Populus euphratica]
15 Hb_000462_040 0.1557785386 - - ATSMC2, putative [Ricinus communis]
16 Hb_001396_130 0.1560641046 - - conserved hypothetical protein [Ricinus communis]
17 Hb_006755_030 0.1569162712 - - BURP domain-containing protein, putative [Theobroma cacao]
18 Hb_000155_230 0.159962652 - - rac gtpase, putative [Ricinus communis]
19 Hb_000377_130 0.1602041555 - - hypothetical protein POPTR_0016s00790g [Populus trichocarpa]
20 Hb_007590_030 0.160899562 - - PREDICTED: iridoid synthase [Jatropha curcas]

Gene co-expression network

sample Hb_019925_010 Hb_019925_010 Hb_001221_250 Hb_001221_250 Hb_019925_010--Hb_001221_250 Hb_125181_010 Hb_125181_010 Hb_019925_010--Hb_125181_010 Hb_000090_010 Hb_000090_010 Hb_019925_010--Hb_000090_010 Hb_001478_030 Hb_001478_030 Hb_019925_010--Hb_001478_030 Hb_006483_020 Hb_006483_020 Hb_019925_010--Hb_006483_020 Hb_101705_040 Hb_101705_040 Hb_019925_010--Hb_101705_040 Hb_000193_090 Hb_000193_090 Hb_001221_250--Hb_000193_090 Hb_001221_250--Hb_125181_010 Hb_007590_030 Hb_007590_030 Hb_001221_250--Hb_007590_030 Hb_004291_060 Hb_004291_060 Hb_001221_250--Hb_004291_060 Hb_044380_010 Hb_044380_010 Hb_001221_250--Hb_044380_010 Hb_125181_010--Hb_000193_090 Hb_125181_010--Hb_007590_030 Hb_125181_010--Hb_044380_010 Hb_006351_120 Hb_006351_120 Hb_125181_010--Hb_006351_120 Hb_004994_230 Hb_004994_230 Hb_000090_010--Hb_004994_230 Hb_000090_010--Hb_101705_040 Hb_034507_030 Hb_034507_030 Hb_000090_010--Hb_034507_030 Hb_000090_010--Hb_006483_020 Hb_002311_020 Hb_002311_020 Hb_000090_010--Hb_002311_020 Hb_028818_020 Hb_028818_020 Hb_000090_010--Hb_028818_020 Hb_001478_030--Hb_000090_010 Hb_001478_030--Hb_006483_020 Hb_004117_230 Hb_004117_230 Hb_001478_030--Hb_004117_230 Hb_001478_030--Hb_028818_020 Hb_001123_300 Hb_001123_300 Hb_001478_030--Hb_001123_300 Hb_006483_020--Hb_034507_030 Hb_006483_020--Hb_004994_230 Hb_000462_040 Hb_000462_040 Hb_006483_020--Hb_000462_040 Hb_006483_020--Hb_004117_230 Hb_007281_010 Hb_007281_010 Hb_006483_020--Hb_007281_010 Hb_101705_040--Hb_004994_230 Hb_101705_040--Hb_028818_020 Hb_000155_230 Hb_000155_230 Hb_101705_040--Hb_000155_230 Hb_101705_040--Hb_034507_030 Hb_001105_150 Hb_001105_150 Hb_101705_040--Hb_001105_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.461452 0 3.8246 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.266499 5.80402

CAGE analysis