Hb_019978_010

Information

Type -
Description -
Location Contig19978: 3-176
Sequence    

Annotation

kegg
ID pop:POPTR_0017s06330g
description hypothetical protein
nr
ID XP_012066188.1
description PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LE94
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23767 PE=3 SV=1
Gene Ontology
ID GO:0000166
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_019978_010 0.0 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
2 Hb_002006_110 0.053799385 transcription factor TF Family: LFY LEAFY-like protein [Pistacia chinensis]
3 Hb_004724_290 0.0548428995 transcription factor TF Family: NAC -
4 Hb_010136_020 0.0559622264 - - stress-induced receptor-like kinase [Medicago truncatula]
5 Hb_036754_040 0.0586280854 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
6 Hb_184752_010 0.0747594592 - - PREDICTED: uncharacterized protein LOC105642593 [Jatropha curcas]
7 Hb_006916_220 0.0814553901 - - hypothetical protein JCGZ_20099 [Jatropha curcas]
8 Hb_013591_010 0.0821868379 - - Mitogen-activated protein kinase kinase kinase 1 [Glycine soja]
9 Hb_000731_020 0.0827070027 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT10-like [Jatropha curcas]
10 Hb_002422_020 0.0871304135 - - PREDICTED: E3 ubiquitin-protein ligase UPL5 [Jatropha curcas]
11 Hb_001677_140 0.0912824687 - - PREDICTED: uncharacterized protein LOC102622520 isoform X1 [Citrus sinensis]
12 Hb_064692_010 0.0957233536 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
13 Hb_041534_010 0.0994177477 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
14 Hb_011429_010 0.1025666979 - - hypothetical protein POPTR_0188s00230g [Populus trichocarpa]
15 Hb_034581_010 0.1035171934 - - PREDICTED: acidic mammalian chitinase-like [Jatropha curcas]
16 Hb_004724_310 0.1067845988 transcription factor TF Family: MYB-related PREDICTED: transcription factor DIVARICATA-like [Jatropha curcas]
17 Hb_003071_040 0.1075757175 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
18 Hb_157957_010 0.1087922167 - - hypothetical protein JCGZ_10722 [Jatropha curcas]
19 Hb_137612_010 0.1137997103 - - cytochrome P450, putative [Ricinus communis]
20 Hb_000925_110 0.1151505157 - - Spotted leaf protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_019978_010 Hb_019978_010 Hb_002006_110 Hb_002006_110 Hb_019978_010--Hb_002006_110 Hb_004724_290 Hb_004724_290 Hb_019978_010--Hb_004724_290 Hb_010136_020 Hb_010136_020 Hb_019978_010--Hb_010136_020 Hb_036754_040 Hb_036754_040 Hb_019978_010--Hb_036754_040 Hb_184752_010 Hb_184752_010 Hb_019978_010--Hb_184752_010 Hb_006916_220 Hb_006916_220 Hb_019978_010--Hb_006916_220 Hb_002006_110--Hb_010136_020 Hb_002006_110--Hb_036754_040 Hb_001677_140 Hb_001677_140 Hb_002006_110--Hb_001677_140 Hb_002006_110--Hb_184752_010 Hb_002006_110--Hb_004724_290 Hb_011429_010 Hb_011429_010 Hb_004724_290--Hb_011429_010 Hb_004724_290--Hb_006916_220 Hb_004724_290--Hb_010136_020 Hb_004724_290--Hb_184752_010 Hb_010136_020--Hb_036754_040 Hb_010136_020--Hb_001677_140 Hb_010136_020--Hb_184752_010 Hb_034581_010 Hb_034581_010 Hb_010136_020--Hb_034581_010 Hb_036754_040--Hb_001677_140 Hb_036754_040--Hb_034581_010 Hb_110356_010 Hb_110356_010 Hb_036754_040--Hb_110356_010 Hb_184752_010--Hb_036754_040 Hb_184752_010--Hb_001677_140 Hb_004724_310 Hb_004724_310 Hb_006916_220--Hb_004724_310 Hb_006916_220--Hb_002006_110 Hb_006916_220--Hb_010136_020 Hb_006916_220--Hb_184752_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3324.15 1084.12 1501.93 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.09383 15.1161

CAGE analysis