Hb_020025_010

Information

Type -
Description -
Location Contig20025: 7603-9042
Sequence    

Annotation

kegg
ID tcc:TCM_006099
description Exostosin family protein
nr
ID XP_012087595.1
description PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Jatropha curcas]
swissprot
ID Q8H038
description Xyloglucan galactosyltransferase KATAMARI1 homolog OS=Oryza sativa subsp. japonica GN=Os03g0144800 PE=2 SV=1
trembl
ID A0A061DW99
description Exostosin family protein OS=Theobroma cacao GN=TCM_006099 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20274: 7543-8723 , PASA_asmbl_20275: 8915-9141
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_020025_010 0.0 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Jatropha curcas]
2 Hb_000035_480 0.1065713138 - - PREDICTED: probable protein phosphatase 2C 59 [Jatropha curcas]
3 Hb_000077_150 0.1135014439 - - PREDICTED: riboflavin synthase [Jatropha curcas]
4 Hb_002235_100 0.1146243697 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 4 isoform X1 [Jatropha curcas]
5 Hb_002303_020 0.1171439351 - - PREDICTED: lysine--tRNA ligase-like [Gossypium raimondii]
6 Hb_003994_160 0.1176837675 - - PREDICTED: uncharacterized protein LOC105131691 isoform X5 [Populus euphratica]
7 Hb_001214_050 0.1205408743 - - PREDICTED: bifunctional monothiol glutaredoxin-S16, chloroplastic [Jatropha curcas]
8 Hb_001408_060 0.1234562213 - - PREDICTED: 60S ribosomal protein L3 [Eucalyptus grandis]
9 Hb_002900_110 0.1240735128 - - amino acid transporter, putative [Ricinus communis]
10 Hb_000914_100 0.124706756 - - unknown [Glycine max]
11 Hb_000840_200 0.1247439725 - - PREDICTED: carbamoyl-phosphate synthase small chain, chloroplastic-like [Jatropha curcas]
12 Hb_000909_080 0.1252402571 - - PREDICTED: inosine-5'-monophosphate dehydrogenase 2-like [Jatropha curcas]
13 Hb_062226_060 0.1254758214 - - PREDICTED: mitochondrial substrate carrier family protein B-like [Jatropha curcas]
14 Hb_140627_010 0.1276894505 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002811_150 0.1285253358 - - PREDICTED: uncharacterized protein LOC105647666 [Jatropha curcas]
16 Hb_100886_010 0.1294662089 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
17 Hb_004218_180 0.1297697564 - - PREDICTED: flowering time control protein FY isoform X2 [Jatropha curcas]
18 Hb_134849_010 0.1303649638 - - ATP synthase subunit d, putative [Ricinus communis]
19 Hb_018272_020 0.1307019853 - - PREDICTED: small glutamine-rich tetratricopeptide repeat-containing protein alpha [Jatropha curcas]
20 Hb_015675_040 0.1311080702 - - PREDICTED: ribose-phosphate pyrophosphokinase 1 [Jatropha curcas]

Gene co-expression network

sample Hb_020025_010 Hb_020025_010 Hb_000035_480 Hb_000035_480 Hb_020025_010--Hb_000035_480 Hb_000077_150 Hb_000077_150 Hb_020025_010--Hb_000077_150 Hb_002235_100 Hb_002235_100 Hb_020025_010--Hb_002235_100 Hb_002303_020 Hb_002303_020 Hb_020025_010--Hb_002303_020 Hb_003994_160 Hb_003994_160 Hb_020025_010--Hb_003994_160 Hb_001214_050 Hb_001214_050 Hb_020025_010--Hb_001214_050 Hb_000465_070 Hb_000465_070 Hb_000035_480--Hb_000465_070 Hb_140627_010 Hb_140627_010 Hb_000035_480--Hb_140627_010 Hb_000457_290 Hb_000457_290 Hb_000035_480--Hb_000457_290 Hb_000403_070 Hb_000403_070 Hb_000035_480--Hb_000403_070 Hb_001892_070 Hb_001892_070 Hb_000035_480--Hb_001892_070 Hb_000392_550 Hb_000392_550 Hb_000035_480--Hb_000392_550 Hb_004644_030 Hb_004644_030 Hb_000077_150--Hb_004644_030 Hb_002762_110 Hb_002762_110 Hb_000077_150--Hb_002762_110 Hb_000077_150--Hb_001214_050 Hb_003106_190 Hb_003106_190 Hb_000077_150--Hb_003106_190 Hb_002078_340 Hb_002078_340 Hb_000077_150--Hb_002078_340 Hb_002811_010 Hb_002811_010 Hb_000077_150--Hb_002811_010 Hb_000909_080 Hb_000909_080 Hb_002235_100--Hb_000909_080 Hb_000204_070 Hb_000204_070 Hb_002235_100--Hb_000204_070 Hb_002235_100--Hb_001214_050 Hb_034083_020 Hb_034083_020 Hb_002235_100--Hb_034083_020 Hb_000111_110 Hb_000111_110 Hb_002235_100--Hb_000111_110 Hb_000840_200 Hb_000840_200 Hb_002303_020--Hb_000840_200 Hb_002534_100 Hb_002534_100 Hb_002303_020--Hb_002534_100 Hb_004712_210 Hb_004712_210 Hb_002303_020--Hb_004712_210 Hb_001728_040 Hb_001728_040 Hb_002303_020--Hb_001728_040 Hb_044653_040 Hb_044653_040 Hb_002303_020--Hb_044653_040 Hb_015675_040 Hb_015675_040 Hb_002303_020--Hb_015675_040 Hb_008695_200 Hb_008695_200 Hb_003994_160--Hb_008695_200 Hb_000086_080 Hb_000086_080 Hb_003994_160--Hb_000086_080 Hb_073973_090 Hb_073973_090 Hb_003994_160--Hb_073973_090 Hb_003053_110 Hb_003053_110 Hb_003994_160--Hb_003053_110 Hb_007192_030 Hb_007192_030 Hb_003994_160--Hb_007192_030 Hb_000941_100 Hb_000941_100 Hb_003994_160--Hb_000941_100 Hb_001214_050--Hb_002762_110 Hb_009778_060 Hb_009778_060 Hb_001214_050--Hb_009778_060 Hb_001723_060 Hb_001723_060 Hb_001214_050--Hb_001723_060 Hb_000032_500 Hb_000032_500 Hb_001214_050--Hb_000032_500 Hb_001195_770 Hb_001195_770 Hb_001214_050--Hb_001195_770
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.595574 1.03838 1.22554 1.35534 0.730595 0.676761
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.916623 2.4724 0.676328 1.6869 2.85059

CAGE analysis