Hb_020156_060

Information

Type -
Description -
Location Contig20156: 27874-31587
Sequence    

Annotation

kegg
ID pmum:103337133
description ankyrin-1-like
nr
ID XP_008238508.1
description PREDICTED: ankyrin-1-like [Prunus mume]
swissprot
ID Q8C8R3
description Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2
trembl
ID W9S5J8
description Uncharacterized protein OS=Morus notabilis GN=L484_023404 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_020156_060 0.0 - - PREDICTED: ankyrin-1-like [Prunus mume]
2 Hb_000205_150 0.1982991051 - - PREDICTED: uncharacterized protein LOC105647752 [Jatropha curcas]
3 Hb_010174_210 0.2081582118 - - PREDICTED: small heat shock protein, chloroplastic-like isoform X1 [Jatropha curcas]
4 Hb_168893_010 0.2197291789 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Nelumbo nucifera]
5 Hb_001621_160 0.233875025 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
6 Hb_029980_010 0.2600758723 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
7 Hb_011639_080 0.2633969766 - - PREDICTED: LOW QUALITY PROTEIN: receptor-like protein kinase FERONIA [Populus euphratica]
8 Hb_085375_010 0.2697663403 - - protein with unknown function [Ricinus communis]
9 Hb_000421_130 0.2757408794 transcription factor TF Family: C2C2-Dof zinc finger protein, putative [Ricinus communis]
10 Hb_001195_190 0.2776914151 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000941_140 0.2816957591 - - PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Jatropha curcas]
12 Hb_029508_010 0.2830494867 transcription factor TF Family: HSF DNA binding protein, putative [Ricinus communis]
13 Hb_004296_010 0.2914265576 - - PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Jatropha curcas]
14 Hb_006913_090 0.2915060205 - - PREDICTED: uncharacterized protein LOC101215996 [Cucumis sativus]
15 Hb_001504_090 0.2939661959 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
16 Hb_154114_030 0.2942196107 - - amino acid binding protein, putative [Ricinus communis]
17 Hb_000505_110 0.2951871692 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump [Jatropha curcas]
18 Hb_008147_050 0.2989309507 - - PREDICTED: uncharacterized protein LOC105646845 [Jatropha curcas]
19 Hb_002473_040 0.3051894408 - - PREDICTED: rRNA methyltransferase 3B, mitochondrial [Jatropha curcas]
20 Hb_004635_130 0.3068759042 - - PREDICTED: probable small nuclear ribonucleoprotein G [Populus euphratica]

Gene co-expression network

sample Hb_020156_060 Hb_020156_060 Hb_000205_150 Hb_000205_150 Hb_020156_060--Hb_000205_150 Hb_010174_210 Hb_010174_210 Hb_020156_060--Hb_010174_210 Hb_168893_010 Hb_168893_010 Hb_020156_060--Hb_168893_010 Hb_001621_160 Hb_001621_160 Hb_020156_060--Hb_001621_160 Hb_029980_010 Hb_029980_010 Hb_020156_060--Hb_029980_010 Hb_011639_080 Hb_011639_080 Hb_020156_060--Hb_011639_080 Hb_000243_090 Hb_000243_090 Hb_000205_150--Hb_000243_090 Hb_000613_040 Hb_000613_040 Hb_000205_150--Hb_000613_040 Hb_000205_150--Hb_011639_080 Hb_154114_030 Hb_154114_030 Hb_000205_150--Hb_154114_030 Hb_006913_090 Hb_006913_090 Hb_000205_150--Hb_006913_090 Hb_000941_140 Hb_000941_140 Hb_010174_210--Hb_000941_140 Hb_010020_010 Hb_010020_010 Hb_010174_210--Hb_010020_010 Hb_004296_010 Hb_004296_010 Hb_010174_210--Hb_004296_010 Hb_008147_050 Hb_008147_050 Hb_010174_210--Hb_008147_050 Hb_000062_110 Hb_000062_110 Hb_010174_210--Hb_000062_110 Hb_046198_020 Hb_046198_020 Hb_168893_010--Hb_046198_020 Hb_000796_060 Hb_000796_060 Hb_168893_010--Hb_000796_060 Hb_005730_100 Hb_005730_100 Hb_168893_010--Hb_005730_100 Hb_168893_010--Hb_029980_010 Hb_085375_010 Hb_085375_010 Hb_168893_010--Hb_085375_010 Hb_005054_050 Hb_005054_050 Hb_001621_160--Hb_005054_050 Hb_002374_560 Hb_002374_560 Hb_001621_160--Hb_002374_560 Hb_001504_090 Hb_001504_090 Hb_001621_160--Hb_001504_090 Hb_000421_130 Hb_000421_130 Hb_001621_160--Hb_000421_130 Hb_005565_080 Hb_005565_080 Hb_001621_160--Hb_005565_080 Hb_029980_010--Hb_005730_100 Hb_002890_190 Hb_002890_190 Hb_029980_010--Hb_002890_190 Hb_000891_080 Hb_000891_080 Hb_029980_010--Hb_000891_080 Hb_000046_220 Hb_000046_220 Hb_029980_010--Hb_000046_220 Hb_000488_030 Hb_000488_030 Hb_029980_010--Hb_000488_030 Hb_000454_190 Hb_000454_190 Hb_011639_080--Hb_000454_190 Hb_011639_080--Hb_000243_090 Hb_019516_030 Hb_019516_030 Hb_011639_080--Hb_019516_030 Hb_006570_010 Hb_006570_010 Hb_011639_080--Hb_006570_010 Hb_002150_110 Hb_002150_110 Hb_011639_080--Hb_002150_110 Hb_000175_630 Hb_000175_630 Hb_011639_080--Hb_000175_630
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0582359 0.229947 0.47352 0.561153 2.7057 0.402503
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0204167 0.080325 0 0.0638614 0.578635

CAGE analysis