Hb_020247_060

Information

Type -
Description -
Location Contig20247: 67957-69248
Sequence    

Annotation

kegg
ID pop:POPTR_0010s20290g
description POPTRDRAFT_1091951; UDP-glucoronosyl/UDP-glucosyl transferase family protein
nr
ID XP_002316247.1
description UDP-glucoronosyl/UDP-glucosyl transferase family protein [Populus trichocarpa]
swissprot
ID Q9FI98
description UDP-glycosyltransferase 76C4 OS=Arabidopsis thaliana GN=UGT76C4 PE=2 SV=1
trembl
ID B9HT32
description UDP-glucoronosyl/UDP-glucosyl transferase family protein OS=Populus trichocarpa GN=POPTR_0010s20290g PE=4 SV=1
Gene Ontology
ID GO:0016758
description udp-glycosyltransferase 76f1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_020247_060 0.0 - - UDP-glucoronosyl/UDP-glucosyl transferase family protein [Populus trichocarpa]
2 Hb_000367_170 0.2250705335 - - PREDICTED: LYR motif-containing protein 4 [Jatropha curcas]
3 Hb_094721_010 0.2338593758 - - PREDICTED: uncharacterized protein LOC104809818, partial [Tarenaya hassleriana]
4 Hb_012324_020 0.234971478 - - -
5 Hb_000039_170 0.2400869333 - - protein MOTHER of FT and TF 1-like [Jatropha curcas]
6 Hb_145890_010 0.2479423689 - - unnamed protein product [Vitis vinifera]
7 Hb_001007_050 0.2495438773 - - hypothetical protein MIMGU_mgv1a0196712mg, partial [Erythranthe guttata]
8 Hb_000348_040 0.2618017492 - - -
9 Hb_015978_070 0.2649416094 - - -
10 Hb_000563_270 0.2690760701 - - -
11 Hb_001369_260 0.2690934217 - - aldo-keto reductase, putative [Ricinus communis]
12 Hb_004297_030 0.2720693873 - - PREDICTED: uncharacterized protein LOC105633198 [Jatropha curcas]
13 Hb_088496_010 0.2735265504 - - PREDICTED: uncharacterized protein LOC104889111 [Beta vulgaris subsp. vulgaris]
14 Hb_003023_040 0.2748181351 - - -
15 Hb_000345_430 0.2827543505 - - 40S ribosomal protein S24A [Hevea brasiliensis]
16 Hb_065525_140 0.2835206695 - - PREDICTED: 50S ribosomal protein L12, chloroplastic [Jatropha curcas]
17 Hb_001842_120 0.2839064087 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
18 Hb_008705_090 0.2846448396 transcription factor TF Family: NF-YC PREDICTED: nuclear transcription factor Y subunit C-2-like [Jatropha curcas]
19 Hb_003992_110 0.2870062946 - - hypothetical protein VITISV_016971 [Vitis vinifera]
20 Hb_012305_120 0.2873426072 - - PREDICTED: 60S ribosomal protein L29-1-like [Glycine max]

Gene co-expression network

sample Hb_020247_060 Hb_020247_060 Hb_000367_170 Hb_000367_170 Hb_020247_060--Hb_000367_170 Hb_094721_010 Hb_094721_010 Hb_020247_060--Hb_094721_010 Hb_012324_020 Hb_012324_020 Hb_020247_060--Hb_012324_020 Hb_000039_170 Hb_000039_170 Hb_020247_060--Hb_000039_170 Hb_145890_010 Hb_145890_010 Hb_020247_060--Hb_145890_010 Hb_001007_050 Hb_001007_050 Hb_020247_060--Hb_001007_050 Hb_015978_070 Hb_015978_070 Hb_000367_170--Hb_015978_070 Hb_001575_030 Hb_001575_030 Hb_000367_170--Hb_001575_030 Hb_001610_130 Hb_001610_130 Hb_000367_170--Hb_001610_130 Hb_011310_060 Hb_011310_060 Hb_000367_170--Hb_011310_060 Hb_001053_160 Hb_001053_160 Hb_000367_170--Hb_001053_160 Hb_000009_040 Hb_000009_040 Hb_000367_170--Hb_000009_040 Hb_094721_010--Hb_012324_020 Hb_000003_770 Hb_000003_770 Hb_094721_010--Hb_000003_770 Hb_088496_010 Hb_088496_010 Hb_094721_010--Hb_088496_010 Hb_004297_030 Hb_004297_030 Hb_094721_010--Hb_004297_030 Hb_001379_130 Hb_001379_130 Hb_094721_010--Hb_001379_130 Hb_005408_040 Hb_005408_040 Hb_094721_010--Hb_005408_040 Hb_012324_020--Hb_000003_770 Hb_012324_020--Hb_088496_010 Hb_012324_020--Hb_001379_130 Hb_012324_020--Hb_004297_030 Hb_012324_020--Hb_005408_040 Hb_000454_110 Hb_000454_110 Hb_000039_170--Hb_000454_110 Hb_001723_080 Hb_001723_080 Hb_000039_170--Hb_001723_080 Hb_012395_200 Hb_012395_200 Hb_000039_170--Hb_012395_200 Hb_000847_140 Hb_000847_140 Hb_000039_170--Hb_000847_140 Hb_012305_120 Hb_012305_120 Hb_000039_170--Hb_012305_120 Hb_003349_070 Hb_003349_070 Hb_000039_170--Hb_003349_070 Hb_002741_030 Hb_002741_030 Hb_145890_010--Hb_002741_030 Hb_145890_010--Hb_012324_020 Hb_145890_010--Hb_094721_010 Hb_001186_050 Hb_001186_050 Hb_145890_010--Hb_001186_050 Hb_005222_020 Hb_005222_020 Hb_145890_010--Hb_005222_020 Hb_000184_190 Hb_000184_190 Hb_145890_010--Hb_000184_190 Hb_010172_100 Hb_010172_100 Hb_001007_050--Hb_010172_100 Hb_008705_090 Hb_008705_090 Hb_001007_050--Hb_008705_090 Hb_003777_230 Hb_003777_230 Hb_001007_050--Hb_003777_230 Hb_004474_010 Hb_004474_010 Hb_001007_050--Hb_004474_010 Hb_001101_010 Hb_001101_010 Hb_001007_050--Hb_001101_010 Hb_002260_020 Hb_002260_020 Hb_001007_050--Hb_002260_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0204207 0.0409036 0 0 0 0.323485
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.327036 0.661444 0.0679183 0 0

CAGE analysis