Hb_020248_010

Information

Type -
Description -
Location Contig20248: 1030-5708
Sequence    

Annotation

kegg
ID vvi:100251718
description TMV resistance protein N-like
nr
ID XP_012086191.1
description PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
swissprot
ID Q9SZ67
description Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1
trembl
ID A0A067JQ32
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21104 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_020248_010 0.0 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
2 Hb_131956_010 0.2355410165 - - hypothetical protein JCGZ_19531 [Jatropha curcas]
3 Hb_015388_030 0.258922828 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_154471_010 0.2608531863 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
5 Hb_022137_040 0.2641975911 - - PREDICTED: MATE efflux family protein LAL5-like [Jatropha curcas]
6 Hb_000189_210 0.2696038817 - - hypothetical protein CICLE_v10005534mg [Citrus clementina]
7 Hb_000025_550 0.278387529 - - conserved hypothetical protein [Ricinus communis]
8 Hb_012760_180 0.2831494275 - - Basic-leucine zipper transcription factor family protein, putative [Theobroma cacao]
9 Hb_001225_090 0.288350264 transcription factor TF Family: RWP-RK transcription factor, putative [Ricinus communis]
10 Hb_000567_080 0.2887064192 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Jatropha curcas]
11 Hb_002235_240 0.2906472423 - - xenotropic and polytropic murine leukemia virus receptor ids-4, putative [Ricinus communis]
12 Hb_006857_030 0.2982110112 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
13 Hb_003849_260 0.298987663 - - PREDICTED: uncharacterized protein LOC105644666 [Jatropha curcas]
14 Hb_000836_120 0.3020385773 - - syntaxin, putative [Ricinus communis]
15 Hb_002686_280 0.3023478802 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
16 Hb_001565_120 0.3029802348 - - PREDICTED: probable glutamate carboxypeptidase 2 isoform X1 [Jatropha curcas]
17 Hb_001269_040 0.3116161505 - - ABC transporter family protein [Hevea brasiliensis]
18 Hb_000175_500 0.3116436757 - - PREDICTED: uncharacterized protein At1g15400 [Populus euphratica]
19 Hb_001584_220 0.3124547452 - - galactinol synthase [Manihot esculenta]
20 Hb_004724_130 0.3125846793 - - PREDICTED: glucan endo-1,3-beta-glucosidase 14 [Jatropha curcas]

Gene co-expression network

sample Hb_020248_010 Hb_020248_010 Hb_131956_010 Hb_131956_010 Hb_020248_010--Hb_131956_010 Hb_015388_030 Hb_015388_030 Hb_020248_010--Hb_015388_030 Hb_154471_010 Hb_154471_010 Hb_020248_010--Hb_154471_010 Hb_022137_040 Hb_022137_040 Hb_020248_010--Hb_022137_040 Hb_000189_210 Hb_000189_210 Hb_020248_010--Hb_000189_210 Hb_000025_550 Hb_000025_550 Hb_020248_010--Hb_000025_550 Hb_002235_240 Hb_002235_240 Hb_131956_010--Hb_002235_240 Hb_131956_010--Hb_022137_040 Hb_129204_060 Hb_129204_060 Hb_131956_010--Hb_129204_060 Hb_009838_060 Hb_009838_060 Hb_131956_010--Hb_009838_060 Hb_004800_190 Hb_004800_190 Hb_131956_010--Hb_004800_190 Hb_004724_130 Hb_004724_130 Hb_131956_010--Hb_004724_130 Hb_010261_010 Hb_010261_010 Hb_015388_030--Hb_010261_010 Hb_012404_040 Hb_012404_040 Hb_015388_030--Hb_012404_040 Hb_000181_440 Hb_000181_440 Hb_015388_030--Hb_000181_440 Hb_003096_040 Hb_003096_040 Hb_015388_030--Hb_003096_040 Hb_001269_040 Hb_001269_040 Hb_015388_030--Hb_001269_040 Hb_025194_010 Hb_025194_010 Hb_015388_030--Hb_025194_010 Hb_003849_260 Hb_003849_260 Hb_154471_010--Hb_003849_260 Hb_005656_140 Hb_005656_140 Hb_154471_010--Hb_005656_140 Hb_154471_010--Hb_131956_010 Hb_001584_220 Hb_001584_220 Hb_154471_010--Hb_001584_220 Hb_154471_010--Hb_004800_190 Hb_000359_110 Hb_000359_110 Hb_154471_010--Hb_000359_110 Hb_001277_140 Hb_001277_140 Hb_022137_040--Hb_001277_140 Hb_000638_210 Hb_000638_210 Hb_022137_040--Hb_000638_210 Hb_000567_080 Hb_000567_080 Hb_022137_040--Hb_000567_080 Hb_022137_040--Hb_009838_060 Hb_012760_010 Hb_012760_010 Hb_022137_040--Hb_012760_010 Hb_075449_020 Hb_075449_020 Hb_000189_210--Hb_075449_020 Hb_000836_120 Hb_000836_120 Hb_000189_210--Hb_000836_120 Hb_000218_030 Hb_000218_030 Hb_000189_210--Hb_000218_030 Hb_000139_200 Hb_000139_200 Hb_000189_210--Hb_000139_200 Hb_005565_010 Hb_005565_010 Hb_000189_210--Hb_005565_010 Hb_000243_380 Hb_000243_380 Hb_000189_210--Hb_000243_380 Hb_000832_330 Hb_000832_330 Hb_000025_550--Hb_000832_330 Hb_009012_010 Hb_009012_010 Hb_000025_550--Hb_009012_010 Hb_000107_320 Hb_000107_320 Hb_000025_550--Hb_000107_320 Hb_000025_550--Hb_000189_210 Hb_001414_130 Hb_001414_130 Hb_000025_550--Hb_001414_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0275866 0.0899264 0 0.00646711 0.0159446 0.00744809
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0152177 0 0.0120937 0

CAGE analysis