Hb_020549_010

Information

Type -
Description -
Location Contig20549: 663-788
Sequence    

Annotation

kegg
ID rcu:RCOM_1685970
description hypothetical protein
nr
ID XP_012077887.1
description PREDICTED: uncharacterized protein LOC105638664 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JP54
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23937 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_020549_010 0.0 - - PREDICTED: uncharacterized protein LOC105638664 isoform X2 [Jatropha curcas]
2 Hb_000982_150 0.2224680353 transcription factor TF Family: Orphans histidine kinase 1 plant, putative [Ricinus communis]
3 Hb_001673_030 0.2317550681 - - hypothetical protein JCGZ_08729 [Jatropha curcas]
4 Hb_001277_410 0.2332660402 - - PREDICTED: uncharacterized protein LOC105632036 [Jatropha curcas]
5 Hb_087221_010 0.2488166652 - - hypothetical protein CISIN_1g033698mg [Citrus sinensis]
6 Hb_013877_020 0.2530971658 - - Cytochrome P450 [Theobroma cacao]
7 Hb_001589_070 0.2630598341 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
8 Hb_036693_010 0.2646055315 - - -
9 Hb_068347_010 0.268569858 - - -
10 Hb_000214_090 0.2829753472 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
11 Hb_007508_040 0.2840950637 - - PREDICTED: ATP synthase subunit gamma, mitochondrial [Jatropha curcas]
12 Hb_012384_050 0.2881934831 - - PREDICTED: uncharacterized protein LOC105641396 [Jatropha curcas]
13 Hb_034667_020 0.2882910206 - - conserved hypothetical protein [Ricinus communis]
14 Hb_005730_130 0.2892825384 - - PRA1 family protein [Theobroma cacao]
15 Hb_000258_320 0.292708313 - - -
16 Hb_001138_010 0.2939183633 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_023051_010 0.2973302153 - - PREDICTED: putative amidase C869.01 [Populus euphratica]
18 Hb_176844_010 0.2985173877 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
19 Hb_010770_010 0.3057862088 - - -
20 Hb_001916_120 0.3076660727 - - snf1-kinase beta subunit, plants, putative [Ricinus communis]

Gene co-expression network

sample Hb_020549_010 Hb_020549_010 Hb_000982_150 Hb_000982_150 Hb_020549_010--Hb_000982_150 Hb_001673_030 Hb_001673_030 Hb_020549_010--Hb_001673_030 Hb_001277_410 Hb_001277_410 Hb_020549_010--Hb_001277_410 Hb_087221_010 Hb_087221_010 Hb_020549_010--Hb_087221_010 Hb_013877_020 Hb_013877_020 Hb_020549_010--Hb_013877_020 Hb_001589_070 Hb_001589_070 Hb_020549_010--Hb_001589_070 Hb_023051_010 Hb_023051_010 Hb_000982_150--Hb_023051_010 Hb_000377_140 Hb_000377_140 Hb_000982_150--Hb_000377_140 Hb_004052_160 Hb_004052_160 Hb_000982_150--Hb_004052_160 Hb_000982_150--Hb_013877_020 Hb_068347_010 Hb_068347_010 Hb_000982_150--Hb_068347_010 Hb_001676_030 Hb_001676_030 Hb_001673_030--Hb_001676_030 Hb_000071_200 Hb_000071_200 Hb_001673_030--Hb_000071_200 Hb_000270_860 Hb_000270_860 Hb_001673_030--Hb_000270_860 Hb_005539_300 Hb_005539_300 Hb_001673_030--Hb_005539_300 Hb_000792_080 Hb_000792_080 Hb_001673_030--Hb_000792_080 Hb_001916_120 Hb_001916_120 Hb_001277_410--Hb_001916_120 Hb_001138_010 Hb_001138_010 Hb_001277_410--Hb_001138_010 Hb_000252_090 Hb_000252_090 Hb_001277_410--Hb_000252_090 Hb_000258_020 Hb_000258_020 Hb_001277_410--Hb_000258_020 Hb_101020_010 Hb_101020_010 Hb_001277_410--Hb_101020_010 Hb_012384_050 Hb_012384_050 Hb_087221_010--Hb_012384_050 Hb_010770_010 Hb_010770_010 Hb_087221_010--Hb_010770_010 Hb_176844_010 Hb_176844_010 Hb_087221_010--Hb_176844_010 Hb_073212_010 Hb_073212_010 Hb_087221_010--Hb_073212_010 Hb_000733_040 Hb_000733_040 Hb_087221_010--Hb_000733_040 Hb_013877_020--Hb_176844_010 Hb_000283_120 Hb_000283_120 Hb_013877_020--Hb_000283_120 Hb_013877_020--Hb_001277_410 Hb_004619_070 Hb_004619_070 Hb_013877_020--Hb_004619_070 Hb_000270_870 Hb_000270_870 Hb_013877_020--Hb_000270_870 Hb_011139_060 Hb_011139_060 Hb_001589_070--Hb_011139_060 Hb_003772_080 Hb_003772_080 Hb_001589_070--Hb_003772_080 Hb_001589_070--Hb_001673_030 Hb_002737_020 Hb_002737_020 Hb_001589_070--Hb_002737_020 Hb_001935_190 Hb_001935_190 Hb_001589_070--Hb_001935_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6214.47 813.461 1493.01 770.937 710.67 2191.91
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
201.378 60.4256 0 0 0

CAGE analysis