Hb_020648_020

Information

Type -
Description -
Location Contig20648: 18679-24693
Sequence    

Annotation

kegg
ID rcu:RCOM_1168720
description xenotropic and polytropic murine leukemia virus receptor pho1, putative
nr
ID XP_002528822.1
description xenotropic and polytropic murine leukemia virus receptor pho1, putative [Ricinus communis]
swissprot
ID Q8S403
description Phosphate transporter PHO1 OS=Arabidopsis thaliana GN=PHO1 PE=2 SV=1
trembl
ID B9SS53
description Xenotropic and polytropic murine leukemia virus receptor pho1, putative OS=Ricinus communis GN=RCOM_1168720 PE=4 SV=1
Gene Ontology
ID GO:0005802
description phosphate transporter pho1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_020648_020 0.0 - - xenotropic and polytropic murine leukemia virus receptor pho1, putative [Ricinus communis]
2 Hb_002410_010 0.0575591227 - - PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]
3 Hb_000338_030 0.0632990154 transcription factor TF Family: HB hypothetical protein JCGZ_21254 [Jatropha curcas]
4 Hb_000098_250 0.0849591068 - - UDP-glucose flavonoid 3-O-glucosyltransferase [Medicago truncatula]
5 Hb_000579_220 0.0931697385 - - transcription factor, putative [Ricinus communis]
6 Hb_084127_010 0.0933013501 - - UDP-glucosyltransferase, putative [Ricinus communis]
7 Hb_065230_010 0.0991895349 - - PREDICTED: uncharacterized protein LOC100814166 isoform X1 [Glycine max]
8 Hb_000521_290 0.1013514138 - - hypothetical protein POPTR_0001s23530g [Populus trichocarpa]
9 Hb_007237_090 0.1048756637 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000521_210 0.1086301695 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
11 Hb_000856_240 0.1116462841 - - short chain alcohol dehydrogenase, putative [Ricinus communis]
12 Hb_003556_070 0.1145806493 - - metal ion binding protein, putative [Ricinus communis]
13 Hb_117127_010 0.115250826 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH106 [Jatropha curcas]
14 Hb_008667_030 0.1163127622 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
15 Hb_002529_080 0.1173227578 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase [Jatropha curcas]
16 Hb_001073_060 0.1195749208 - - phosphate transporter 1 [Hevea brasiliensis]
17 Hb_000280_110 0.1203474992 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
18 Hb_002085_070 0.1211331312 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
19 Hb_006615_180 0.1215203837 - - hypothetical protein B456_003G103400 [Gossypium raimondii]
20 Hb_073119_010 0.122556544 - - hypothetical protein POPTR_0004s20690g [Populus trichocarpa]

Gene co-expression network

sample Hb_020648_020 Hb_020648_020 Hb_002410_010 Hb_002410_010 Hb_020648_020--Hb_002410_010 Hb_000338_030 Hb_000338_030 Hb_020648_020--Hb_000338_030 Hb_000098_250 Hb_000098_250 Hb_020648_020--Hb_000098_250 Hb_000579_220 Hb_000579_220 Hb_020648_020--Hb_000579_220 Hb_084127_010 Hb_084127_010 Hb_020648_020--Hb_084127_010 Hb_065230_010 Hb_065230_010 Hb_020648_020--Hb_065230_010 Hb_002410_010--Hb_000098_250 Hb_002410_010--Hb_000338_030 Hb_117127_010 Hb_117127_010 Hb_002410_010--Hb_117127_010 Hb_002410_010--Hb_065230_010 Hb_000771_030 Hb_000771_030 Hb_002410_010--Hb_000771_030 Hb_008667_030 Hb_008667_030 Hb_000338_030--Hb_008667_030 Hb_000338_030--Hb_000098_250 Hb_002529_080 Hb_002529_080 Hb_000338_030--Hb_002529_080 Hb_000338_030--Hb_117127_010 Hb_000098_250--Hb_117127_010 Hb_000098_250--Hb_008667_030 Hb_000098_250--Hb_002529_080 Hb_000098_250--Hb_000771_030 Hb_007237_090 Hb_007237_090 Hb_000579_220--Hb_007237_090 Hb_000579_220--Hb_084127_010 Hb_006615_190 Hb_006615_190 Hb_000579_220--Hb_006615_190 Hb_000172_010 Hb_000172_010 Hb_000579_220--Hb_000172_010 Hb_000521_210 Hb_000521_210 Hb_000579_220--Hb_000521_210 Hb_084127_010--Hb_007237_090 Hb_084127_010--Hb_006615_190 Hb_084127_010--Hb_000521_210 Hb_074312_020 Hb_074312_020 Hb_084127_010--Hb_074312_020 Hb_065230_010--Hb_000771_030 Hb_131662_010 Hb_131662_010 Hb_065230_010--Hb_131662_010 Hb_065230_010--Hb_000098_250 Hb_000417_120 Hb_000417_120 Hb_065230_010--Hb_000417_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00845323 3.3931 0.59021 0.862438 0 0.00800464
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.22418 0.320451

CAGE analysis