Hb_020805_070

Information

Type -
Description -
Location Contig20805: 56763-60328
Sequence    

Annotation

kegg
ID rcu:RCOM_1601740
description Protein MLO, putative
nr
ID XP_012073610.1
description PREDICTED: MLO protein homolog 1-like [Jatropha curcas]
swissprot
ID O49873
description MLO protein homolog 1 OS=Hordeum vulgare GN=MLO-H1 PE=3 SV=1
trembl
ID B9R8R5
description MLO-like protein OS=Ricinus communis GN=MLO PE=3 SV=1
Gene Ontology
ID GO:0016021
description mlo protein homolog 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_020805_070 0.0 - - PREDICTED: MLO protein homolog 1-like [Jatropha curcas]
2 Hb_001405_040 0.0637823898 - - PREDICTED: 3-ketoacyl-CoA synthase 11-like [Jatropha curcas]
3 Hb_004162_320 0.0663679118 - - PREDICTED: uncharacterized protein LOC105628009 isoform X1 [Jatropha curcas]
4 Hb_003506_010 0.0720441575 - - hypothetical protein JCGZ_01146 [Jatropha curcas]
5 Hb_005892_040 0.0838565942 - - hypothetical protein JCGZ_02368 [Jatropha curcas]
6 Hb_002078_320 0.0864049863 - - PREDICTED: glucuronoxylan 4-O-methyltransferase 1 [Jatropha curcas]
7 Hb_000901_010 0.0929857194 - - PREDICTED: putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 [Jatropha curcas]
8 Hb_000162_200 0.0939824956 - - PREDICTED: uncharacterized protein LOC105641759 isoform X2 [Jatropha curcas]
9 Hb_000152_120 0.094211167 - - alpha-l-fucosidase, putative [Ricinus communis]
10 Hb_001244_070 0.0971383343 - - hypothetical protein POPTR_0004s13470g [Populus trichocarpa]
11 Hb_000260_750 0.1000694444 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 7-like [Jatropha curcas]
12 Hb_004855_080 0.1025642132 - - hypothetical protein JCGZ_25039 [Jatropha curcas]
13 Hb_000380_140 0.107153701 - - PREDICTED: uncharacterized protein LOC105628069 [Jatropha curcas]
14 Hb_000880_040 0.1100348133 - - -
15 Hb_000181_220 0.1102526107 - - PREDICTED: MATE efflux family protein LAL5-like isoform X2 [Jatropha curcas]
16 Hb_170023_010 0.1123699506 - - hypothetical protein EUGRSUZ_C03837 [Eucalyptus grandis]
17 Hb_002601_140 0.112800398 - - signal transducer, putative [Ricinus communis]
18 Hb_000337_030 0.1133419523 - - amino acid transporter, putative [Ricinus communis]
19 Hb_000008_150 0.1143733838 - - PREDICTED: putative cyclic nucleotide-gated ion channel 15 [Jatropha curcas]
20 Hb_004946_010 0.1157121157 - - hypothetical protein POPTR_0013s035502g, partial [Populus trichocarpa]

Gene co-expression network

sample Hb_020805_070 Hb_020805_070 Hb_001405_040 Hb_001405_040 Hb_020805_070--Hb_001405_040 Hb_004162_320 Hb_004162_320 Hb_020805_070--Hb_004162_320 Hb_003506_010 Hb_003506_010 Hb_020805_070--Hb_003506_010 Hb_005892_040 Hb_005892_040 Hb_020805_070--Hb_005892_040 Hb_002078_320 Hb_002078_320 Hb_020805_070--Hb_002078_320 Hb_000901_010 Hb_000901_010 Hb_020805_070--Hb_000901_010 Hb_004855_080 Hb_004855_080 Hb_001405_040--Hb_004855_080 Hb_000008_150 Hb_000008_150 Hb_001405_040--Hb_000008_150 Hb_004116_050 Hb_004116_050 Hb_001405_040--Hb_004116_050 Hb_001405_040--Hb_003506_010 Hb_001405_040--Hb_005892_040 Hb_004162_320--Hb_003506_010 Hb_004162_320--Hb_005892_040 Hb_004162_320--Hb_002078_320 Hb_000162_200 Hb_000162_200 Hb_004162_320--Hb_000162_200 Hb_004162_320--Hb_001405_040 Hb_003506_010--Hb_005892_040 Hb_003506_010--Hb_002078_320 Hb_003506_010--Hb_004855_080 Hb_003506_010--Hb_000162_200 Hb_026240_020 Hb_026240_020 Hb_005892_040--Hb_026240_020 Hb_000977_030 Hb_000977_030 Hb_005892_040--Hb_000977_030 Hb_002078_320--Hb_000901_010 Hb_000987_020 Hb_000987_020 Hb_002078_320--Hb_000987_020 Hb_000185_170 Hb_000185_170 Hb_002078_320--Hb_000185_170 Hb_000901_010--Hb_000987_020 Hb_004946_010 Hb_004946_010 Hb_000901_010--Hb_004946_010 Hb_000901_010--Hb_004855_080 Hb_000260_750 Hb_000260_750 Hb_000901_010--Hb_000260_750
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0307354 0.124095 0.104702 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0828293 0.131209

CAGE analysis