Hb_021065_010

Information

Type -
Description -
Location Contig21065: 1101-9011
Sequence    

Annotation

kegg
ID rcu:RCOM_0560530
description ATP binding protein, putative (EC:2.7.11.30 2.7.11.25)
nr
ID XP_012440677.1
description PREDICTED: wall-associated receptor kinase 2-like isoform X2 [Gossypium raimondii]
swissprot
ID Q39191
description Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2
trembl
ID A0A059BYJ2
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04287 PE=3 SV=1
Gene Ontology
ID GO:0005622
description wall-associated kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_021065_010 0.0 - - PREDICTED: wall-associated receptor kinase 2-like isoform X2 [Gossypium raimondii]
2 Hb_003097_130 0.0726654783 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000418_170 0.0982812592 - - PREDICTED: ABC transporter C family member 12-like isoform X4 [Populus euphratica]
4 Hb_001247_150 0.1071230149 - - hypothetical protein JCGZ_23179 [Jatropha curcas]
5 Hb_005675_050 0.1077236886 - - alpha-glucosidase, putative [Ricinus communis]
6 Hb_000527_050 0.1119464071 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001085_190 0.1287057788 transcription factor TF Family: ERF AP2 domain-containing transcription factor family protein [Populus trichocarpa]
8 Hb_000112_080 0.1358907286 - - PREDICTED: glutamate receptor 2.1-like [Populus euphratica]
9 Hb_002272_120 0.1359650086 - - PREDICTED: serine/threonine-protein kinase CDL1 [Jatropha curcas]
10 Hb_000932_060 0.1367708329 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001366_290 0.137120541 - - Alpha-expansin 1 precursor, putative [Ricinus communis]
12 Hb_009113_080 0.1374698048 - - PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog [Jatropha curcas]
13 Hb_001157_050 0.1375011943 - - cation efflux protein/ zinc transporter, putative [Ricinus communis]
14 Hb_001287_090 0.1379140943 - - Endoglucanase 4 [Aegilops tauschii]
15 Hb_000003_750 0.1411896427 - - PREDICTED: lysM domain receptor-like kinase 3 [Jatropha curcas]
16 Hb_007290_050 0.1427815697 - - PREDICTED: uncharacterized protein LOC105629472 isoform X1 [Jatropha curcas]
17 Hb_004122_010 0.1432150221 - - PREDICTED: uncharacterized protein LOC105630923 [Jatropha curcas]
18 Hb_009767_060 0.1433767196 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
19 Hb_026240_020 0.1447985601 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At1g59780 [Jatropha curcas]
20 Hb_004592_010 0.1474567635 transcription factor TF Family: bZIP PREDICTED: transcription factor RF2b-like [Jatropha curcas]

Gene co-expression network

sample Hb_021065_010 Hb_021065_010 Hb_003097_130 Hb_003097_130 Hb_021065_010--Hb_003097_130 Hb_000418_170 Hb_000418_170 Hb_021065_010--Hb_000418_170 Hb_001247_150 Hb_001247_150 Hb_021065_010--Hb_001247_150 Hb_005675_050 Hb_005675_050 Hb_021065_010--Hb_005675_050 Hb_000527_050 Hb_000527_050 Hb_021065_010--Hb_000527_050 Hb_001085_190 Hb_001085_190 Hb_021065_010--Hb_001085_190 Hb_003097_130--Hb_005675_050 Hb_004122_010 Hb_004122_010 Hb_003097_130--Hb_004122_010 Hb_001287_090 Hb_001287_090 Hb_003097_130--Hb_001287_090 Hb_009767_060 Hb_009767_060 Hb_003097_130--Hb_009767_060 Hb_005181_170 Hb_005181_170 Hb_003097_130--Hb_005181_170 Hb_000627_040 Hb_000627_040 Hb_000418_170--Hb_000627_040 Hb_022092_110 Hb_022092_110 Hb_000418_170--Hb_022092_110 Hb_005730_110 Hb_005730_110 Hb_000418_170--Hb_005730_110 Hb_001936_180 Hb_001936_180 Hb_000418_170--Hb_001936_180 Hb_000418_170--Hb_005675_050 Hb_000932_060 Hb_000932_060 Hb_001247_150--Hb_000932_060 Hb_000834_180 Hb_000834_180 Hb_001247_150--Hb_000834_180 Hb_001247_150--Hb_000418_170 Hb_009113_080 Hb_009113_080 Hb_001247_150--Hb_009113_080 Hb_001247_150--Hb_022092_110 Hb_005675_050--Hb_004122_010 Hb_003666_070 Hb_003666_070 Hb_005675_050--Hb_003666_070 Hb_007632_160 Hb_007632_160 Hb_005675_050--Hb_007632_160 Hb_000739_170 Hb_000739_170 Hb_005675_050--Hb_000739_170 Hb_010381_100 Hb_010381_100 Hb_000527_050--Hb_010381_100 Hb_001828_110 Hb_001828_110 Hb_000527_050--Hb_001828_110 Hb_001157_050 Hb_001157_050 Hb_000527_050--Hb_001157_050 Hb_000527_050--Hb_000418_170 Hb_001366_290 Hb_001366_290 Hb_000527_050--Hb_001366_290 Hb_000735_020 Hb_000735_020 Hb_001085_190--Hb_000735_020 Hb_011918_070 Hb_011918_070 Hb_001085_190--Hb_011918_070 Hb_001085_190--Hb_009113_080 Hb_012518_080 Hb_012518_080 Hb_001085_190--Hb_012518_080 Hb_000005_360 Hb_000005_360 Hb_001085_190--Hb_000005_360 Hb_003606_050 Hb_003606_050 Hb_001085_190--Hb_003606_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0432126 0.247903 0.280341 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.021852 0.0679632 0.146237

CAGE analysis