Hb_021888_130

Information

Type -
Description -
Location Contig21888: 111034-113772
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_021888_130 0.0 - - -
2 Hb_049415_020 0.1404733135 - - -
3 Hb_000330_170 0.1653813259 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein RF9 [Jatropha curcas]
4 Hb_002400_090 0.1771740892 - - -
5 Hb_008725_200 0.1879021582 - - PREDICTED: uncharacterized protein LOC105642590 [Jatropha curcas]
6 Hb_033448_010 0.1932942623 - - hypothetical protein JCGZ_19772 [Jatropha curcas]
7 Hb_000243_010 0.1933770678 - - PREDICTED: uncharacterized protein LOC105639166 [Jatropha curcas]
8 Hb_000329_600 0.1982152301 - - PREDICTED: cell number regulator 6-like isoform X2 [Populus euphratica]
9 Hb_000205_110 0.2000696249 - - PREDICTED: protein prenyltransferase alpha subunit repeat-containing protein 1 isoform X2 [Populus euphratica]
10 Hb_001258_080 0.2022592151 - - PREDICTED: uncharacterized protein LOC105639921 [Jatropha curcas]
11 Hb_005224_050 0.2045921289 - - PREDICTED: uncharacterized protein LOC105632350 [Jatropha curcas]
12 Hb_001629_100 0.2061314475 - - PREDICTED: uncharacterized protein LOC100252136 isoform X2 [Vitis vinifera]
13 Hb_002078_050 0.206874975 - - PREDICTED: protein kish-like [Nicotiana tomentosiformis]
14 Hb_002539_090 0.2075377815 - - PREDICTED: uncharacterized protein LOC103489178 [Cucumis melo]
15 Hb_000563_530 0.2096341595 - - PREDICTED: uncharacterized protein LOC105643453 [Jatropha curcas]
16 Hb_017711_010 0.2100157415 - - PREDICTED: mitochondrial import receptor subunit TOM9-2 [Jatropha curcas]
17 Hb_098315_120 0.2101625263 - - -
18 Hb_000603_220 0.2114147985 - - PREDICTED: MADS-box transcription factor 23 [Jatropha curcas]
19 Hb_007317_060 0.2138311477 - - 60S ribosomal protein L10aB [Hevea brasiliensis]
20 Hb_012395_200 0.2163017108 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_021888_130 Hb_021888_130 Hb_049415_020 Hb_049415_020 Hb_021888_130--Hb_049415_020 Hb_000330_170 Hb_000330_170 Hb_021888_130--Hb_000330_170 Hb_002400_090 Hb_002400_090 Hb_021888_130--Hb_002400_090 Hb_008725_200 Hb_008725_200 Hb_021888_130--Hb_008725_200 Hb_033448_010 Hb_033448_010 Hb_021888_130--Hb_033448_010 Hb_000243_010 Hb_000243_010 Hb_021888_130--Hb_000243_010 Hb_002078_050 Hb_002078_050 Hb_049415_020--Hb_002078_050 Hb_049415_020--Hb_000330_170 Hb_049415_020--Hb_008725_200 Hb_049415_020--Hb_033448_010 Hb_001999_060 Hb_001999_060 Hb_049415_020--Hb_001999_060 Hb_000603_220 Hb_000603_220 Hb_000330_170--Hb_000603_220 Hb_000061_160 Hb_000061_160 Hb_000330_170--Hb_000061_160 Hb_002200_120 Hb_002200_120 Hb_000330_170--Hb_002200_120 Hb_000330_170--Hb_033448_010 Hb_000777_060 Hb_000777_060 Hb_000330_170--Hb_000777_060 Hb_000369_090 Hb_000369_090 Hb_000330_170--Hb_000369_090 Hb_000329_600 Hb_000329_600 Hb_002400_090--Hb_000329_600 Hb_002400_090--Hb_000603_220 Hb_002374_460 Hb_002374_460 Hb_002400_090--Hb_002374_460 Hb_002400_090--Hb_000330_170 Hb_005935_010 Hb_005935_010 Hb_002400_090--Hb_005935_010 Hb_002687_050 Hb_002687_050 Hb_008725_200--Hb_002687_050 Hb_134789_010 Hb_134789_010 Hb_008725_200--Hb_134789_010 Hb_008725_200--Hb_033448_010 Hb_000032_540 Hb_000032_540 Hb_008725_200--Hb_000032_540 Hb_000144_090 Hb_000144_090 Hb_008725_200--Hb_000144_090 Hb_000563_530 Hb_000563_530 Hb_033448_010--Hb_000563_530 Hb_033448_010--Hb_000369_090 Hb_000184_120 Hb_000184_120 Hb_033448_010--Hb_000184_120 Hb_033448_010--Hb_002200_120 Hb_000189_530 Hb_000189_530 Hb_033448_010--Hb_000189_530 Hb_000366_100 Hb_000366_100 Hb_033448_010--Hb_000366_100 Hb_000175_400 Hb_000175_400 Hb_000243_010--Hb_000175_400 Hb_025193_050 Hb_025193_050 Hb_000243_010--Hb_025193_050 Hb_000152_430 Hb_000152_430 Hb_000243_010--Hb_000152_430 Hb_000003_350 Hb_000003_350 Hb_000243_010--Hb_000003_350 Hb_000608_420 Hb_000608_420 Hb_000243_010--Hb_000608_420 Hb_000318_380 Hb_000318_380 Hb_000243_010--Hb_000318_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.127839 0 0 0.134577 0.437144 0.868054
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.393588 0.927647 0.525324 0.256764 0

CAGE analysis