Hb_022378_010

Information

Type -
Description -
Location Contig22378: 1660-5926
Sequence    

Annotation

kegg
ID rcu:RCOM_0293420
description hypothetical protein
nr
ID XP_012073001.1
description PREDICTED: uncharacterized protein LOC105634715 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KMJ4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06786 PE=4 SV=1
Gene Ontology
ID GO:0031072
description chaperone protein dnaj-related isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_23272: 1903-5882
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_022378_010 0.0 - - PREDICTED: uncharacterized protein LOC105634715 isoform X1 [Jatropha curcas]
2 Hb_000208_190 0.0785037215 - - PREDICTED: uncharacterized protein LOC105648580 [Jatropha curcas]
3 Hb_068804_090 0.0939401703 - - PREDICTED: probable cytosolic oligopeptidase A [Jatropha curcas]
4 Hb_004375_050 0.0952559847 - - PREDICTED: putative GTP diphosphokinase RSH1, chloroplastic isoform X1 [Jatropha curcas]
5 Hb_000107_340 0.0969583103 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105637652 [Jatropha curcas]
6 Hb_000340_040 0.0973005923 - - PREDICTED: HUA2-like protein 3 isoform X3 [Jatropha curcas]
7 Hb_005511_140 0.0985022771 - - Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis]
8 Hb_000529_180 0.1006592206 - - PREDICTED: mechanosensitive ion channel protein 2, chloroplastic [Jatropha curcas]
9 Hb_000748_090 0.1031668719 - - glucose inhibited division protein A, putative [Ricinus communis]
10 Hb_000445_090 0.1034964762 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ASHH2 [Jatropha curcas]
11 Hb_000555_020 0.10520298 - - APO protein 2, chloroplast precursor, putative [Ricinus communis]
12 Hb_000586_020 0.1094110533 desease resistance Gene Name: NB-ARC hypothetical protein F383_02497 [Gossypium arboreum]
13 Hb_007012_030 0.1110751633 - - PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like isoform X1 [Jatropha curcas]
14 Hb_013749_050 0.1111164325 - - PREDICTED: uncharacterized protein LOC105647765 isoform X2 [Jatropha curcas]
15 Hb_010344_020 0.1121903544 - - PREDICTED: pentatricopeptide repeat-containing protein At1g79490, mitochondrial [Jatropha curcas]
16 Hb_022092_030 0.1132181066 - - PREDICTED: lipoyl synthase, mitochondrial [Jatropha curcas]
17 Hb_000788_030 0.1136109203 - - PREDICTED: dynamin-2A [Jatropha curcas]
18 Hb_000673_010 0.1143140326 - - PREDICTED: uncharacterized protein LOC105636554 isoform X1 [Jatropha curcas]
19 Hb_000169_020 0.1151846941 transcription factor TF Family: C2C2-CO-like hypothetical protein RCOM_0555710 [Ricinus communis]
20 Hb_002660_190 0.1170894799 - - PREDICTED: dnaJ protein P58IPK homolog [Jatropha curcas]

Gene co-expression network

sample Hb_022378_010 Hb_022378_010 Hb_000208_190 Hb_000208_190 Hb_022378_010--Hb_000208_190 Hb_068804_090 Hb_068804_090 Hb_022378_010--Hb_068804_090 Hb_004375_050 Hb_004375_050 Hb_022378_010--Hb_004375_050 Hb_000107_340 Hb_000107_340 Hb_022378_010--Hb_000107_340 Hb_000340_040 Hb_000340_040 Hb_022378_010--Hb_000340_040 Hb_005511_140 Hb_005511_140 Hb_022378_010--Hb_005511_140 Hb_004705_160 Hb_004705_160 Hb_000208_190--Hb_004705_160 Hb_005000_080 Hb_005000_080 Hb_000208_190--Hb_005000_080 Hb_138585_030 Hb_138585_030 Hb_000208_190--Hb_138585_030 Hb_000788_030 Hb_000788_030 Hb_000208_190--Hb_000788_030 Hb_010344_020 Hb_010344_020 Hb_000208_190--Hb_010344_020 Hb_000748_090 Hb_000748_090 Hb_068804_090--Hb_000748_090 Hb_013749_050 Hb_013749_050 Hb_068804_090--Hb_013749_050 Hb_007012_030 Hb_007012_030 Hb_068804_090--Hb_007012_030 Hb_000243_120 Hb_000243_120 Hb_068804_090--Hb_000243_120 Hb_030736_040 Hb_030736_040 Hb_068804_090--Hb_030736_040 Hb_004629_030 Hb_004629_030 Hb_068804_090--Hb_004629_030 Hb_002290_030 Hb_002290_030 Hb_004375_050--Hb_002290_030 Hb_001629_090 Hb_001629_090 Hb_004375_050--Hb_001629_090 Hb_005147_080 Hb_005147_080 Hb_004375_050--Hb_005147_080 Hb_000340_150 Hb_000340_150 Hb_004375_050--Hb_000340_150 Hb_000318_130 Hb_000318_130 Hb_004375_050--Hb_000318_130 Hb_001195_770 Hb_001195_770 Hb_004375_050--Hb_001195_770 Hb_000555_020 Hb_000555_020 Hb_000107_340--Hb_000555_020 Hb_005235_070 Hb_005235_070 Hb_000107_340--Hb_005235_070 Hb_000035_090 Hb_000035_090 Hb_000107_340--Hb_000035_090 Hb_102948_010 Hb_102948_010 Hb_000107_340--Hb_102948_010 Hb_003747_120 Hb_003747_120 Hb_000107_340--Hb_003747_120 Hb_000169_020 Hb_000169_020 Hb_000340_040--Hb_000169_020 Hb_000340_040--Hb_005511_140 Hb_022092_030 Hb_022092_030 Hb_000340_040--Hb_022092_030 Hb_001511_090 Hb_001511_090 Hb_000340_040--Hb_001511_090 Hb_006100_020 Hb_006100_020 Hb_000340_040--Hb_006100_020 Hb_001008_130 Hb_001008_130 Hb_000340_040--Hb_001008_130 Hb_000023_360 Hb_000023_360 Hb_005511_140--Hb_000023_360 Hb_000282_080 Hb_000282_080 Hb_005511_140--Hb_000282_080 Hb_001195_450 Hb_001195_450 Hb_005511_140--Hb_001195_450 Hb_005511_140--Hb_000169_020 Hb_073973_090 Hb_073973_090 Hb_005511_140--Hb_073973_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.74884 12.8328 17.1123 7.84549 5.7824 5.78553
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.96163 7.55304 9.34889 6.73486 24.1654

CAGE analysis