Hb_022425_020

Information

Type -
Description -
Location Contig22425: 17946-18422
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_022425_020 0.0 - - -
2 Hb_002636_140 0.0838481703 - - PREDICTED: GDSL esterase/lipase At1g71691-like [Populus euphratica]
3 Hb_002108_020 0.1242005091 - - hypothetical protein JCGZ_16012 [Jatropha curcas]
4 Hb_001366_280 0.1645546917 - - PREDICTED: uncharacterized protein LOC105642732 [Jatropha curcas]
5 Hb_012675_020 0.1754064238 - - hypothetical protein CISIN_1g018227mg [Citrus sinensis]
6 Hb_002942_170 0.180848124 - - acyl carrier protein, putative [Ricinus communis]
7 Hb_009225_030 0.1838852832 - - ring finger protein, putative [Ricinus communis]
8 Hb_104011_010 0.1838914123 - - PREDICTED: serine carboxypeptidase-like 18 [Jatropha curcas]
9 Hb_185246_010 0.1839227079 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
10 Hb_121058_010 0.1839239067 - - ATP binding protein, putative [Ricinus communis]
11 Hb_000140_010 0.1839317476 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
12 Hb_001456_010 0.1839673709 - - o-methyltransferase, putative [Ricinus communis]
13 Hb_003531_110 0.1839680165 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
14 Hb_001504_250 0.1840150483 - - ABC transporter family protein [Hevea brasiliensis]
15 Hb_045150_010 0.1842950993 - - PREDICTED: metalloendoproteinase 1-like [Populus euphratica]
16 Hb_001377_140 0.1844580047 - - hypothetical protein MIMGU_mgv1a016697mg [Erythranthe guttata]
17 Hb_003529_020 0.1845054583 - - hypothetical protein JCGZ_04979 [Jatropha curcas]
18 Hb_002490_070 0.1846048271 - - PREDICTED: uncharacterized protein LOC105123384 isoform X1 [Populus euphratica]
19 Hb_002254_020 0.1846661743 transcription factor TF Family: GRAS PREDICTED: nodulation-signaling pathway 2 protein-like [Jatropha curcas]
20 Hb_000272_060 0.1846846295 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_022425_020 Hb_022425_020 Hb_002636_140 Hb_002636_140 Hb_022425_020--Hb_002636_140 Hb_002108_020 Hb_002108_020 Hb_022425_020--Hb_002108_020 Hb_001366_280 Hb_001366_280 Hb_022425_020--Hb_001366_280 Hb_012675_020 Hb_012675_020 Hb_022425_020--Hb_012675_020 Hb_002942_170 Hb_002942_170 Hb_022425_020--Hb_002942_170 Hb_009225_030 Hb_009225_030 Hb_022425_020--Hb_009225_030 Hb_002636_140--Hb_002108_020 Hb_002636_140--Hb_012675_020 Hb_000134_100 Hb_000134_100 Hb_002636_140--Hb_000134_100 Hb_168451_010 Hb_168451_010 Hb_002636_140--Hb_168451_010 Hb_053224_010 Hb_053224_010 Hb_002636_140--Hb_053224_010 Hb_002108_020--Hb_000134_100 Hb_002108_020--Hb_012675_020 Hb_001916_010 Hb_001916_010 Hb_002108_020--Hb_001916_010 Hb_004907_040 Hb_004907_040 Hb_002108_020--Hb_004907_040 Hb_046204_010 Hb_046204_010 Hb_001366_280--Hb_046204_010 Hb_007304_020 Hb_007304_020 Hb_001366_280--Hb_007304_020 Hb_021576_050 Hb_021576_050 Hb_001366_280--Hb_021576_050 Hb_000035_230 Hb_000035_230 Hb_001366_280--Hb_000035_230 Hb_000138_120 Hb_000138_120 Hb_001366_280--Hb_000138_120 Hb_034498_010 Hb_034498_010 Hb_001366_280--Hb_034498_010 Hb_012675_020--Hb_000134_100 Hb_002534_140 Hb_002534_140 Hb_012675_020--Hb_002534_140 Hb_001689_060 Hb_001689_060 Hb_012675_020--Hb_001689_060 Hb_001329_010 Hb_001329_010 Hb_002942_170--Hb_001329_010 Hb_002811_220 Hb_002811_220 Hb_002942_170--Hb_002811_220 Hb_173638_010 Hb_173638_010 Hb_002942_170--Hb_173638_010 Hb_007904_050 Hb_007904_050 Hb_002942_170--Hb_007904_050 Hb_002942_170--Hb_001366_280 Hb_104011_010 Hb_104011_010 Hb_009225_030--Hb_104011_010 Hb_185246_010 Hb_185246_010 Hb_009225_030--Hb_185246_010 Hb_121058_010 Hb_121058_010 Hb_009225_030--Hb_121058_010 Hb_001456_010 Hb_001456_010 Hb_009225_030--Hb_001456_010 Hb_001504_250 Hb_001504_250 Hb_009225_030--Hb_001504_250 Hb_000140_010 Hb_000140_010 Hb_009225_030--Hb_000140_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.901143 0.927591 0 0.129221
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis