Hb_022461_010

Information

Type -
Description -
Location Contig22461: 3993-5908
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_022461_010 0.0 - - -
2 Hb_001054_130 0.0979592866 - - Protein SSU72, putative [Ricinus communis]
3 Hb_011828_020 0.0980856638 transcription factor TF Family: NF-YB PREDICTED: nuclear transcription factor Y subunit B-10-like isoform X2 [Jatropha curcas]
4 Hb_001477_130 0.0984653215 - - PREDICTED: uncharacterized protein LOC105646871 [Jatropha curcas]
5 Hb_003266_050 0.0986361367 - - PREDICTED: small nuclear ribonucleoprotein Sm D1 [Amborella trichopoda]
6 Hb_002374_160 0.1041605315 - - PREDICTED: N-glycosylase/DNA lyase OGG1 isoform X1 [Jatropha curcas]
7 Hb_001048_020 0.1055402187 - - PREDICTED: E3 ubiquitin-protein ligase FANCL isoform X1 [Jatropha curcas]
8 Hb_000057_200 0.1066649605 - - PREDICTED: methyltransferase-like protein 22 [Jatropha curcas]
9 Hb_005398_030 0.1068095709 - - PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase 1-like [Jatropha curcas]
10 Hb_000613_140 0.1074929766 - - PREDICTED: indole-3-glycerol phosphate synthase, chloroplastic [Jatropha curcas]
11 Hb_004374_200 0.1100919821 - - putative GMP synthase [Oxybasis rubra]
12 Hb_004128_190 0.1110091488 - - PREDICTED: dirigent protein 17-like [Jatropha curcas]
13 Hb_001269_320 0.1114354765 - - 40S ribosomal protein S12A [Hevea brasiliensis]
14 Hb_000205_160 0.1114486576 - - Peroxisome biogenesis protein 12 [Morus notabilis]
15 Hb_005400_030 0.1115194832 - - PREDICTED: LYR motif-containing protein At3g19508 [Jatropha curcas]
16 Hb_004055_140 0.1121868066 - - PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Jatropha curcas]
17 Hb_000024_080 0.1135599083 - - PREDICTED: probable complex I intermediate-associated protein 30 isoform X2 [Jatropha curcas]
18 Hb_000815_040 0.1137425953 transcription factor TF Family: M-type hypothetical protein JCGZ_15623 [Jatropha curcas]
19 Hb_002477_330 0.1140490206 - - PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like [Jatropha curcas]
20 Hb_012305_050 0.1157017039 - - unnamed protein product [Coffea canephora]

Gene co-expression network

sample Hb_022461_010 Hb_022461_010 Hb_001054_130 Hb_001054_130 Hb_022461_010--Hb_001054_130 Hb_011828_020 Hb_011828_020 Hb_022461_010--Hb_011828_020 Hb_001477_130 Hb_001477_130 Hb_022461_010--Hb_001477_130 Hb_003266_050 Hb_003266_050 Hb_022461_010--Hb_003266_050 Hb_002374_160 Hb_002374_160 Hb_022461_010--Hb_002374_160 Hb_001048_020 Hb_001048_020 Hb_022461_010--Hb_001048_020 Hb_004055_140 Hb_004055_140 Hb_001054_130--Hb_004055_140 Hb_000157_030 Hb_000157_030 Hb_001054_130--Hb_000157_030 Hb_001054_130--Hb_003266_050 Hb_000057_200 Hb_000057_200 Hb_001054_130--Hb_000057_200 Hb_009117_030 Hb_009117_030 Hb_001054_130--Hb_009117_030 Hb_000395_080 Hb_000395_080 Hb_011828_020--Hb_000395_080 Hb_000877_060 Hb_000877_060 Hb_011828_020--Hb_000877_060 Hb_011828_020--Hb_001477_130 Hb_003020_230 Hb_003020_230 Hb_011828_020--Hb_003020_230 Hb_000613_140 Hb_000613_140 Hb_011828_020--Hb_000613_140 Hb_000923_050 Hb_000923_050 Hb_011828_020--Hb_000923_050 Hb_004223_280 Hb_004223_280 Hb_001477_130--Hb_004223_280 Hb_002685_170 Hb_002685_170 Hb_001477_130--Hb_002685_170 Hb_002137_020 Hb_002137_020 Hb_001477_130--Hb_002137_020 Hb_000720_120 Hb_000720_120 Hb_001477_130--Hb_000720_120 Hb_005357_030 Hb_005357_030 Hb_001477_130--Hb_005357_030 Hb_005389_150 Hb_005389_150 Hb_003266_050--Hb_005389_150 Hb_000815_040 Hb_000815_040 Hb_003266_050--Hb_000815_040 Hb_010691_060 Hb_010691_060 Hb_003266_050--Hb_010691_060 Hb_001278_110 Hb_001278_110 Hb_003266_050--Hb_001278_110 Hb_002890_140 Hb_002890_140 Hb_003266_050--Hb_002890_140 Hb_003058_130 Hb_003058_130 Hb_003266_050--Hb_003058_130 Hb_004128_190 Hb_004128_190 Hb_002374_160--Hb_004128_190 Hb_000245_130 Hb_000245_130 Hb_002374_160--Hb_000245_130 Hb_000398_180 Hb_000398_180 Hb_002374_160--Hb_000398_180 Hb_001454_140 Hb_001454_140 Hb_002374_160--Hb_001454_140 Hb_002374_160--Hb_000720_120 Hb_002232_170 Hb_002232_170 Hb_002374_160--Hb_002232_170 Hb_003615_010 Hb_003615_010 Hb_001048_020--Hb_003615_010 Hb_001048_020--Hb_000613_140 Hb_001226_160 Hb_001226_160 Hb_001048_020--Hb_001226_160 Hb_000510_130 Hb_000510_130 Hb_001048_020--Hb_000510_130 Hb_001252_110 Hb_001252_110 Hb_001048_020--Hb_001252_110 Hb_023732_070 Hb_023732_070 Hb_001048_020--Hb_023732_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.37405 2.24984 1.60489 1.86169 2.27647 8.09243
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.99731 6.36838 3.44765 3.66711 1.27257

CAGE analysis