Hb_022614_010

Information

Type -
Description -
Location Contig22614: 435-721
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_022614_010 0.0 - - -
2 Hb_162090_010 0.0841465473 - - PREDICTED: uncharacterized protein LOC105642032 [Jatropha curcas]
3 Hb_006162_020 0.0999123697 - - -
4 Hb_017014_020 0.1083869326 - - -
5 Hb_011200_010 0.1655779882 - - -
6 Hb_005107_020 0.1737585772 - - hypothetical protein JCGZ_25266 [Jatropha curcas]
7 Hb_013394_100 0.1796550075 - - PREDICTED: uncharacterized protein LOC105135144 [Populus euphratica]
8 Hb_009083_030 0.1812751354 - - hypothetical protein POPTR_0007s14760g [Populus trichocarpa]
9 Hb_000034_090 0.1827344033 transcription factor TF Family: M-type MPF2-like, partial [Dunalia fasciculata]
10 Hb_183522_010 0.1851332165 - - Far upstream element-binding protein, putative [Ricinus communis]
11 Hb_006794_010 0.1855468422 - - elicitor-responsive protein [Hevea brasiliensis]
12 Hb_188313_010 0.1875231816 - - PREDICTED: LOW QUALITY PROTEIN: carboxymethylenebutenolidase homolog [Jatropha curcas]
13 Hb_000953_120 0.1961430131 - - -
14 Hb_114079_010 0.1985999594 - - hypothetical protein CICLE_v10008147mg [Citrus clementina]
15 Hb_000025_080 0.1991951923 - - -
16 Hb_099298_010 0.1996394633 - - -
17 Hb_002016_030 0.2019606201 - - conserved hypothetical protein [Ricinus communis]
18 Hb_041601_010 0.2052056463 - - -
19 Hb_133648_010 0.2127865553 - - -
20 Hb_009119_010 0.2131565342 - - -

Gene co-expression network

sample Hb_022614_010 Hb_022614_010 Hb_162090_010 Hb_162090_010 Hb_022614_010--Hb_162090_010 Hb_006162_020 Hb_006162_020 Hb_022614_010--Hb_006162_020 Hb_017014_020 Hb_017014_020 Hb_022614_010--Hb_017014_020 Hb_011200_010 Hb_011200_010 Hb_022614_010--Hb_011200_010 Hb_005107_020 Hb_005107_020 Hb_022614_010--Hb_005107_020 Hb_013394_100 Hb_013394_100 Hb_022614_010--Hb_013394_100 Hb_162090_010--Hb_006162_020 Hb_162090_010--Hb_017014_020 Hb_162090_010--Hb_005107_020 Hb_000953_120 Hb_000953_120 Hb_162090_010--Hb_000953_120 Hb_041601_010 Hb_041601_010 Hb_162090_010--Hb_041601_010 Hb_006162_020--Hb_017014_020 Hb_006162_020--Hb_005107_020 Hb_000034_090 Hb_000034_090 Hb_006162_020--Hb_000034_090 Hb_183522_010 Hb_183522_010 Hb_006162_020--Hb_183522_010 Hb_009083_030 Hb_009083_030 Hb_017014_020--Hb_009083_030 Hb_188313_010 Hb_188313_010 Hb_017014_020--Hb_188313_010 Hb_000025_080 Hb_000025_080 Hb_017014_020--Hb_000025_080 Hb_006794_010 Hb_006794_010 Hb_011200_010--Hb_006794_010 Hb_011200_010--Hb_005107_020 Hb_011200_010--Hb_013394_100 Hb_012675_080 Hb_012675_080 Hb_011200_010--Hb_012675_080 Hb_011200_010--Hb_006162_020 Hb_005107_020--Hb_000034_090 Hb_005107_020--Hb_006794_010 Hb_005107_020--Hb_012675_080 Hb_003030_040 Hb_003030_040 Hb_005107_020--Hb_003030_040 Hb_182713_020 Hb_182713_020 Hb_013394_100--Hb_182713_020 Hb_000789_150 Hb_000789_150 Hb_013394_100--Hb_000789_150 Hb_099298_010 Hb_099298_010 Hb_013394_100--Hb_099298_010 Hb_002079_040 Hb_002079_040 Hb_013394_100--Hb_002079_040 Hb_108227_010 Hb_108227_010 Hb_013394_100--Hb_108227_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
63.377 138.815 77.8345 1567.3 30.2261 808.64
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
116.212 110.128 13.4929 76.7234 24.2778

CAGE analysis