Hb_022680_020

Information

Type -
Description -
Location Contig22680: 10764-11401
Sequence    

Annotation

kegg
ID rcu:RCOM_0393610
description hypothetical protein
nr
ID XP_012092467.1
description PREDICTED: MLP-like protein 423 [Jatropha curcas]
swissprot
ID Q93VR4
description MLP-like protein 423 OS=Arabidopsis thaliana GN=MLP423 PE=2 SV=1
trembl
ID A0A067JMT2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21786 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_022680_020 0.0 - - PREDICTED: MLP-like protein 423 [Jatropha curcas]
2 Hb_004491_020 0.2556933066 - - PREDICTED: putative inactive cadmium/zinc-transporting ATPase HMA3 [Jatropha curcas]
3 Hb_000264_150 0.256131987 - - PREDICTED: uncharacterized protein LOC103870759 [Brassica rapa]
4 Hb_001722_090 0.2597764854 - - cyanohydrin UDP-glucosyltransferase UGT85K5 [Manihot esculenta]
5 Hb_001709_100 0.2599260096 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
6 Hb_001247_340 0.2616157258 transcription factor TF Family: M-type mads box protein, putative [Ricinus communis]
7 Hb_162189_010 0.2858778381 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
8 Hb_007545_040 0.2885010038 - - PREDICTED: uncharacterized protein LOC104884077 [Beta vulgaris subsp. vulgaris]
9 Hb_004324_170 0.2917582565 - - -
10 Hb_156850_010 0.3197921516 - - PREDICTED: uncharacterized protein LOC105635403 [Jatropha curcas]
11 Hb_000139_160 0.3278454944 - - conserved hypothetical protein [Ricinus communis]
12 Hb_006831_060 0.341614678 - - hypothetical protein JCGZ_16419 [Jatropha curcas]
13 Hb_000402_110 0.3563264644 - - hypothetical protein JCGZ_17786 [Jatropha curcas]
14 Hb_000025_380 0.3610239147 - - hypothetical protein JCGZ_22787 [Jatropha curcas]
15 Hb_005686_070 0.3640028565 - - hypothetical protein RCOM_1078540 [Ricinus communis]
16 Hb_007853_020 0.365342746 - - protein BOLA2 [Jatropha curcas]
17 Hb_132840_040 0.3665546592 - - 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis]
18 Hb_011316_070 0.370157321 - - acyltransferase, putative [Ricinus communis]
19 Hb_000093_070 0.3730511948 transcription factor TF Family: C2C2-YABBY Protein CRABS CLAW, putative [Ricinus communis]
20 Hb_087999_010 0.3735374942 - - PREDICTED: uncharacterized protein LOC105640118 [Jatropha curcas]

Gene co-expression network

sample Hb_022680_020 Hb_022680_020 Hb_004491_020 Hb_004491_020 Hb_022680_020--Hb_004491_020 Hb_000264_150 Hb_000264_150 Hb_022680_020--Hb_000264_150 Hb_001722_090 Hb_001722_090 Hb_022680_020--Hb_001722_090 Hb_001709_100 Hb_001709_100 Hb_022680_020--Hb_001709_100 Hb_001247_340 Hb_001247_340 Hb_022680_020--Hb_001247_340 Hb_162189_010 Hb_162189_010 Hb_022680_020--Hb_162189_010 Hb_004491_020--Hb_000264_150 Hb_004491_020--Hb_001722_090 Hb_004491_020--Hb_001709_100 Hb_004491_020--Hb_001247_340 Hb_004491_020--Hb_162189_010 Hb_007545_040 Hb_007545_040 Hb_004491_020--Hb_007545_040 Hb_000264_150--Hb_001722_090 Hb_000264_150--Hb_001709_100 Hb_000264_150--Hb_001247_340 Hb_000264_150--Hb_162189_010 Hb_000264_150--Hb_007545_040 Hb_001722_090--Hb_001709_100 Hb_001722_090--Hb_001247_340 Hb_001722_090--Hb_162189_010 Hb_001722_090--Hb_007545_040 Hb_001709_100--Hb_001247_340 Hb_001709_100--Hb_162189_010 Hb_001709_100--Hb_007545_040 Hb_001247_340--Hb_162189_010 Hb_001247_340--Hb_007545_040 Hb_004324_170 Hb_004324_170 Hb_001247_340--Hb_004324_170 Hb_162189_010--Hb_007545_040 Hb_162189_010--Hb_004324_170 Hb_156850_010 Hb_156850_010 Hb_162189_010--Hb_156850_010 Hb_132840_040 Hb_132840_040 Hb_162189_010--Hb_132840_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.20913 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.158655 0 0 0.0523652 0

CAGE analysis