Hb_022693_130

Information

Type -
Description -
Location Contig22693: 265876-277593
Sequence    

Annotation

kegg
ID rcu:RCOM_0866600
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.10.1)
nr
ID XP_002519895.1
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
swissprot
ID C0LGF4
description LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1
trembl
ID B9S1N0
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative OS=Ricinus communis GN=RCOM_0866600 PE=3 SV=1
Gene Ontology
ID GO:0016021
description lrr receptor-like serine threonine-protein kinase fei 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_23570: 265768-277721 , PASA_asmbl_23571: 266418-277721 , PASA_asmbl_23575: 265877-271572
cDNA
(Sanger)
(ID:Location)		 033_K05.ab1: 265877-271572 , 040_I24.ab1: 265768-269063

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_022693_130 0.0 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
2 Hb_160271_010 0.057547338 - - PREDICTED: FAD synthase-like isoform X2 [Jatropha curcas]
3 Hb_005062_060 0.0673585456 - - PREDICTED: uncharacterized protein At4g06598-like [Jatropha curcas]
4 Hb_068079_010 0.0739382662 - - -
5 Hb_000645_180 0.0762816658 rubber biosynthesis Gene Name: Dihydrolipoamide dehydrogenase Lipoamide dehydrogenase 1 isoform 1 [Theobroma cacao]
6 Hb_000108_020 0.0768826631 - - hypothetical protein POPTR_0019s02430g [Populus trichocarpa]
7 Hb_000107_250 0.0807950686 - - voltage-gated clc-type chloride channel, putative [Ricinus communis]
8 Hb_003462_060 0.0890366421 - - PREDICTED: ABC transporter G family member 24-like [Jatropha curcas]
9 Hb_002053_050 0.0892649066 - - Kinesin heavy chain, putative [Ricinus communis]
10 Hb_006006_060 0.0895403068 - - PREDICTED: triacylglycerol lipase 1 isoform X2 [Jatropha curcas]
11 Hb_003058_100 0.0906616284 - - PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial [Jatropha curcas]
12 Hb_174865_040 0.0909195733 - - PREDICTED: crt homolog 1 isoform X2 [Jatropha curcas]
13 Hb_010620_050 0.0920142877 - - PREDICTED: uncharacterized protein LOC105646119 [Jatropha curcas]
14 Hb_000291_180 0.092205678 - - PREDICTED: meiotically up-regulated gene 185 protein [Jatropha curcas]
15 Hb_004705_160 0.0930822947 - - PREDICTED: protein MEI2-like 4 [Jatropha curcas]
16 Hb_073973_120 0.0931173766 - - zinc finger protein, putative [Ricinus communis]
17 Hb_000320_190 0.0946400792 - - PREDICTED: aminomethyltransferase, mitochondrial [Jatropha curcas]
18 Hb_156850_100 0.0959627725 - - hypothetical protein CICLE_v10001788mg [Citrus clementina]
19 Hb_000862_100 0.0976739918 - - PREDICTED: plastid division protein CDP1, chloroplastic [Jatropha curcas]
20 Hb_002837_040 0.0976788605 - - Transmembrane emp24 domain-containing protein 10 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_022693_130 Hb_022693_130 Hb_160271_010 Hb_160271_010 Hb_022693_130--Hb_160271_010 Hb_005062_060 Hb_005062_060 Hb_022693_130--Hb_005062_060 Hb_068079_010 Hb_068079_010 Hb_022693_130--Hb_068079_010 Hb_000645_180 Hb_000645_180 Hb_022693_130--Hb_000645_180 Hb_000108_020 Hb_000108_020 Hb_022693_130--Hb_000108_020 Hb_000107_250 Hb_000107_250 Hb_022693_130--Hb_000107_250 Hb_000291_180 Hb_000291_180 Hb_160271_010--Hb_000291_180 Hb_000320_190 Hb_000320_190 Hb_160271_010--Hb_000320_190 Hb_156850_100 Hb_156850_100 Hb_160271_010--Hb_156850_100 Hb_002107_050 Hb_002107_050 Hb_160271_010--Hb_002107_050 Hb_160271_010--Hb_000108_020 Hb_002053_050 Hb_002053_050 Hb_005062_060--Hb_002053_050 Hb_005062_060--Hb_160271_010 Hb_005656_070 Hb_005656_070 Hb_005062_060--Hb_005656_070 Hb_005062_060--Hb_000107_250 Hb_000453_030 Hb_000453_030 Hb_005062_060--Hb_000453_030 Hb_002828_060 Hb_002828_060 Hb_068079_010--Hb_002828_060 Hb_068079_010--Hb_000108_020 Hb_000862_100 Hb_000862_100 Hb_068079_010--Hb_000862_100 Hb_068079_010--Hb_000645_180 Hb_004705_160 Hb_004705_160 Hb_068079_010--Hb_004705_160 Hb_012779_080 Hb_012779_080 Hb_000645_180--Hb_012779_080 Hb_000645_180--Hb_000108_020 Hb_070624_010 Hb_070624_010 Hb_000645_180--Hb_070624_010 Hb_000645_180--Hb_000320_190 Hb_000085_070 Hb_000085_070 Hb_000108_020--Hb_000085_070 Hb_000480_040 Hb_000480_040 Hb_000108_020--Hb_000480_040 Hb_000000_310 Hb_000000_310 Hb_000107_250--Hb_000000_310 Hb_073973_120 Hb_073973_120 Hb_000107_250--Hb_073973_120 Hb_000107_250--Hb_002053_050 Hb_003682_070 Hb_003682_070 Hb_000107_250--Hb_003682_070 Hb_000107_250--Hb_004705_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.8726 13.343 40.376 38.2939 13.0253 15.6989
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.25189 10.7294 9.94098 13.6761 44.1254

CAGE analysis