Hb_022819_010

Information

Type -
Description -
Location Contig22819: 4815-5117
Sequence    

Annotation

kegg
ID rcu:RCOM_0885080
description Disease resistance protein RPS5, putative
nr
ID XP_002522629.1
description Disease resistance protein RPS5, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S9G0
description Disease resistance protein RPS5, putative OS=Ricinus communis GN=RCOM_0885080 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_022819_010 0.0 - - Disease resistance protein RPS5, putative [Ricinus communis]
2 Hb_182680_010 0.235298652 - - hypothetical protein JCGZ_07831 [Jatropha curcas]
3 Hb_002762_090 0.2465231233 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
4 Hb_002639_010 0.2494961606 - - pseudouridylate synthase, putative [Ricinus communis]
5 Hb_000544_100 0.2647956387 - - hypothetical protein JCGZ_03636 [Jatropha curcas]
6 Hb_004894_010 0.2674068781 - - -
7 Hb_096811_010 0.2710344543 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At1g61190 [Vitis vinifera]
8 Hb_006916_190 0.2719220597 - - ubiquitin-protein ligase, putative [Ricinus communis]
9 Hb_019893_010 0.2768328785 - - PREDICTED: putative disease resistance protein RGA4, partial [Jatropha curcas]
10 Hb_080147_060 0.2775973094 - - PREDICTED: cyclin-dependent kinase F-1 isoform X1 [Jatropha curcas]
11 Hb_029977_010 0.2794347029 - - catalytic, putative [Ricinus communis]
12 Hb_007943_160 0.2807236323 - - PREDICTED: aspartate aminotransferase, cytoplasmic [Jatropha curcas]
13 Hb_022276_020 0.2828568077 - - -
14 Hb_000589_210 0.2832012423 - - PREDICTED: uncharacterized protein LOC105647439 [Jatropha curcas]
15 Hb_001652_070 0.2869588804 - - PREDICTED: uncharacterized protein LOC103439285 [Malus domestica]
16 Hb_000116_550 0.2877934258 - - conserved hypothetical protein [Ricinus communis]
17 Hb_168386_010 0.2892197985 - - Disease resistance protein RPS5, putative [Ricinus communis]
18 Hb_001758_120 0.2906566365 - - unnamed protein product [Vitis vinifera]
19 Hb_136872_010 0.2908586732 - - serine/threonine-specific receptor protein kinase, putative [Ricinus communis]
20 Hb_000915_070 0.2920063934 - - ATP binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_022819_010 Hb_022819_010 Hb_182680_010 Hb_182680_010 Hb_022819_010--Hb_182680_010 Hb_002762_090 Hb_002762_090 Hb_022819_010--Hb_002762_090 Hb_002639_010 Hb_002639_010 Hb_022819_010--Hb_002639_010 Hb_000544_100 Hb_000544_100 Hb_022819_010--Hb_000544_100 Hb_004894_010 Hb_004894_010 Hb_022819_010--Hb_004894_010 Hb_096811_010 Hb_096811_010 Hb_022819_010--Hb_096811_010 Hb_004143_120 Hb_004143_120 Hb_182680_010--Hb_004143_120 Hb_000343_100 Hb_000343_100 Hb_182680_010--Hb_000343_100 Hb_007943_160 Hb_007943_160 Hb_182680_010--Hb_007943_160 Hb_000209_110 Hb_000209_110 Hb_182680_010--Hb_000209_110 Hb_009467_040 Hb_009467_040 Hb_182680_010--Hb_009467_040 Hb_003428_100 Hb_003428_100 Hb_182680_010--Hb_003428_100 Hb_116478_010 Hb_116478_010 Hb_002762_090--Hb_116478_010 Hb_000300_590 Hb_000300_590 Hb_002762_090--Hb_000300_590 Hb_001758_120 Hb_001758_120 Hb_002762_090--Hb_001758_120 Hb_025254_020 Hb_025254_020 Hb_002762_090--Hb_025254_020 Hb_002475_070 Hb_002475_070 Hb_002762_090--Hb_002475_070 Hb_002016_020 Hb_002016_020 Hb_002762_090--Hb_002016_020 Hb_001652_070 Hb_001652_070 Hb_002639_010--Hb_001652_070 Hb_168386_010 Hb_168386_010 Hb_002639_010--Hb_168386_010 Hb_002639_010--Hb_004894_010 Hb_074670_010 Hb_074670_010 Hb_002639_010--Hb_074670_010 Hb_002639_010--Hb_096811_010 Hb_004462_010 Hb_004462_010 Hb_000544_100--Hb_004462_010 Hb_000544_100--Hb_000209_110 Hb_004724_120 Hb_004724_120 Hb_000544_100--Hb_004724_120 Hb_002477_220 Hb_002477_220 Hb_000544_100--Hb_002477_220 Hb_001636_020 Hb_001636_020 Hb_000544_100--Hb_001636_020 Hb_000544_100--Hb_182680_010 Hb_000243_110 Hb_000243_110 Hb_004894_010--Hb_000243_110 Hb_037960_010 Hb_037960_010 Hb_004894_010--Hb_037960_010 Hb_001410_100 Hb_001410_100 Hb_004894_010--Hb_001410_100 Hb_019893_010 Hb_019893_010 Hb_004894_010--Hb_019893_010 Hb_000093_150 Hb_000093_150 Hb_096811_010--Hb_000093_150 Hb_012553_020 Hb_012553_020 Hb_096811_010--Hb_012553_020 Hb_096811_010--Hb_019893_010 Hb_000077_330 Hb_000077_330 Hb_096811_010--Hb_000077_330 Hb_096811_010--Hb_000343_100 Hb_008749_090 Hb_008749_090 Hb_096811_010--Hb_008749_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.881499 2.70447 0.933056 18.191 2.49034 11.0754
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 2.46572 51.4343 6.25048

CAGE analysis