Hb_022845_010

Information

Type -
Description -
Location Contig22845: 4874-8219
Sequence    

Annotation

kegg
ID cic:CICLE_v10000719mg
description hypothetical protein
nr
ID XP_012084631.1
description PREDICTED: protein NRT1/ PTR FAMILY 5.10-like [Jatropha curcas]
swissprot
ID Q0WP01
description Protein NRT1/ PTR FAMILY 5.10 OS=Arabidopsis thaliana GN=NPF5.10 PE=2 SV=1
trembl
ID A0A067K6A4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20271 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_022845_010 0.0 - - PREDICTED: protein NRT1/ PTR FAMILY 5.10-like [Jatropha curcas]
2 Hb_001322_220 0.0554637364 - - Major pollen allergen Ory s 1 precursor, putative [Ricinus communis]
3 Hb_001190_030 0.0613818068 - - hypothetical protein VITISV_017115 [Vitis vinifera]
4 Hb_000654_060 0.0630124238 - - hypothetical protein CICLE_v10027550mg [Citrus clementina]
5 Hb_120289_010 0.0898520512 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
6 Hb_152528_010 0.0935558809 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
7 Hb_000162_160 0.0963061938 - - PREDICTED: auxin transporter-like protein 5 [Populus euphratica]
8 Hb_034498_010 0.1041359636 - - PREDICTED: uncharacterized protein LOC105636842 [Jatropha curcas]
9 Hb_000756_030 0.1125568437 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
10 Hb_022465_010 0.1153551002 - - hypothetical protein JCGZ_06012 [Jatropha curcas]
11 Hb_125781_010 0.1170090865 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
12 Hb_000056_290 0.1176643019 - - conserved hypothetical protein [Ricinus communis]
13 Hb_108744_010 0.1183520321 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
14 Hb_000243_270 0.1252952886 - - Pectinesterase-2 precursor, putative [Ricinus communis]
15 Hb_064476_010 0.1253047222 - - PREDICTED: beta-Amyrin Synthase 1-like [Sesamum indicum]
16 Hb_001300_110 0.1253133311 - - PREDICTED: bidirectional sugar transporter N3-like [Jatropha curcas]
17 Hb_007524_020 0.1253804677 - - PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA4 [Jatropha curcas]
18 Hb_013607_020 0.1254400024 transcription factor TF Family: bZIP DNA binding protein, putative [Ricinus communis]
19 Hb_166937_010 0.1255292968 - - PREDICTED: formyltetrahydrofolate deformylase 1, mitochondrial-like [Jatropha curcas]
20 Hb_000506_060 0.1255716456 - - PREDICTED: LOW QUALITY PROTEIN: subtilisin-like protease [Malus domestica]

Gene co-expression network

sample Hb_022845_010 Hb_022845_010 Hb_001322_220 Hb_001322_220 Hb_022845_010--Hb_001322_220 Hb_001190_030 Hb_001190_030 Hb_022845_010--Hb_001190_030 Hb_000654_060 Hb_000654_060 Hb_022845_010--Hb_000654_060 Hb_120289_010 Hb_120289_010 Hb_022845_010--Hb_120289_010 Hb_152528_010 Hb_152528_010 Hb_022845_010--Hb_152528_010 Hb_000162_160 Hb_000162_160 Hb_022845_010--Hb_000162_160 Hb_001322_220--Hb_001190_030 Hb_000185_190 Hb_000185_190 Hb_001322_220--Hb_000185_190 Hb_015754_010 Hb_015754_010 Hb_001322_220--Hb_015754_010 Hb_001031_130 Hb_001031_130 Hb_001322_220--Hb_001031_130 Hb_002081_110 Hb_002081_110 Hb_001322_220--Hb_002081_110 Hb_002986_150 Hb_002986_150 Hb_001190_030--Hb_002986_150 Hb_001728_090 Hb_001728_090 Hb_001190_030--Hb_001728_090 Hb_003549_110 Hb_003549_110 Hb_001190_030--Hb_003549_110 Hb_004712_120 Hb_004712_120 Hb_001190_030--Hb_004712_120 Hb_000654_060--Hb_152528_010 Hb_000756_030 Hb_000756_030 Hb_000654_060--Hb_000756_030 Hb_108744_010 Hb_108744_010 Hb_000654_060--Hb_108744_010 Hb_001398_110 Hb_001398_110 Hb_000654_060--Hb_001398_110 Hb_022465_010 Hb_022465_010 Hb_000654_060--Hb_022465_010 Hb_000056_290 Hb_000056_290 Hb_120289_010--Hb_000056_290 Hb_120289_010--Hb_000162_160 Hb_000700_020 Hb_000700_020 Hb_120289_010--Hb_000700_020 Hb_001329_050 Hb_001329_050 Hb_120289_010--Hb_001329_050 Hb_120289_010--Hb_001322_220 Hb_152528_010--Hb_000756_030 Hb_152528_010--Hb_108744_010 Hb_152528_010--Hb_001398_110 Hb_004241_140 Hb_004241_140 Hb_152528_010--Hb_004241_140 Hb_000162_160--Hb_001322_220 Hb_000527_020 Hb_000527_020 Hb_000162_160--Hb_000527_020 Hb_000162_160--Hb_001190_030 Hb_056196_020 Hb_056196_020 Hb_000162_160--Hb_056196_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0106139 0.206634 0.124705 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis