Hb_022958_020

Information

Type -
Description -
Location Contig22958: 3756-8605
Sequence    

Annotation

kegg
ID gmx:100779568
description dentin sialophosphoprotein-like
nr
ID XP_012089458.1
description PREDICTED: B2 protein-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JI05
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23414 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_022958_020 0.0 - - PREDICTED: B2 protein-like [Jatropha curcas]
2 Hb_001199_120 0.0510970529 - - PREDICTED: uncharacterized protein LOC103437171 [Malus domestica]
3 Hb_000574_500 0.1227935871 - - hypothetical protein JCGZ_06123 [Jatropha curcas]
4 Hb_180924_010 0.2711667465 - - CPI-4 [Morus alba var. atropurpurea]
5 Hb_070268_010 0.3202230858 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
6 Hb_005870_010 0.3242753663 - - -
7 Hb_019863_020 0.3267336429 - - PREDICTED: wound-induced protein 1 [Jatropha curcas]
8 Hb_006775_050 0.340677775 - - PREDICTED: GDSL esterase/lipase At1g29670 isoform X2 [Nicotiana sylvestris]
9 Hb_000179_160 0.3432522369 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-3-like [Jatropha curcas]
10 Hb_007218_030 0.3489094517 - - PREDICTED: uncharacterized protein At4g02000-like [Jatropha curcas]
11 Hb_087999_010 0.3565555775 - - PREDICTED: uncharacterized protein LOC105640118 [Jatropha curcas]
12 Hb_000093_070 0.3565557643 transcription factor TF Family: C2C2-YABBY Protein CRABS CLAW, putative [Ricinus communis]
13 Hb_132840_040 0.3566776719 - - 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis]
14 Hb_009078_040 0.3594354592 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
15 Hb_156850_010 0.3650714078 - - PREDICTED: uncharacterized protein LOC105635403 [Jatropha curcas]
16 Hb_004324_170 0.3788514217 - - -
17 Hb_087388_010 0.3804114641 transcription factor TF Family: bHLH PREDICTED: transcription factor DYT1 [Jatropha curcas]
18 Hb_007545_040 0.3811320382 - - PREDICTED: uncharacterized protein LOC104884077 [Beta vulgaris subsp. vulgaris]
19 Hb_009486_110 0.3814907267 - - PREDICTED: rac-like GTP-binding protein RAC2 [Jatropha curcas]
20 Hb_027450_020 0.3824021652 - - PREDICTED: B3 domain-containing protein At2g31420-like [Citrus sinensis]

Gene co-expression network

sample Hb_022958_020 Hb_022958_020 Hb_001199_120 Hb_001199_120 Hb_022958_020--Hb_001199_120 Hb_000574_500 Hb_000574_500 Hb_022958_020--Hb_000574_500 Hb_180924_010 Hb_180924_010 Hb_022958_020--Hb_180924_010 Hb_070268_010 Hb_070268_010 Hb_022958_020--Hb_070268_010 Hb_005870_010 Hb_005870_010 Hb_022958_020--Hb_005870_010 Hb_019863_020 Hb_019863_020 Hb_022958_020--Hb_019863_020 Hb_001199_120--Hb_000574_500 Hb_001199_120--Hb_180924_010 Hb_001199_120--Hb_005870_010 Hb_001199_120--Hb_019863_020 Hb_006775_050 Hb_006775_050 Hb_001199_120--Hb_006775_050 Hb_000179_160 Hb_000179_160 Hb_000574_500--Hb_000179_160 Hb_007218_030 Hb_007218_030 Hb_000574_500--Hb_007218_030 Hb_000574_500--Hb_070268_010 Hb_009078_040 Hb_009078_040 Hb_000574_500--Hb_009078_040 Hb_002986_040 Hb_002986_040 Hb_180924_010--Hb_002986_040 Hb_008453_040 Hb_008453_040 Hb_180924_010--Hb_008453_040 Hb_028621_030 Hb_028621_030 Hb_180924_010--Hb_028621_030 Hb_000009_370 Hb_000009_370 Hb_180924_010--Hb_000009_370 Hb_070268_010--Hb_019863_020 Hb_070268_010--Hb_000179_160 Hb_070268_010--Hb_007218_030 Hb_070268_010--Hb_006775_050 Hb_009486_110 Hb_009486_110 Hb_070268_010--Hb_009486_110 Hb_027450_020 Hb_027450_020 Hb_070268_010--Hb_027450_020 Hb_010866_020 Hb_010866_020 Hb_005870_010--Hb_010866_020 Hb_000170_170 Hb_000170_170 Hb_005870_010--Hb_000170_170 Hb_087388_010 Hb_087388_010 Hb_005870_010--Hb_087388_010 Hb_004308_010 Hb_004308_010 Hb_005870_010--Hb_004308_010 Hb_020259_020 Hb_020259_020 Hb_005870_010--Hb_020259_020 Hb_000347_520 Hb_000347_520 Hb_005870_010--Hb_000347_520 Hb_019863_020--Hb_006775_050 Hb_019863_020--Hb_009486_110 Hb_019863_020--Hb_027450_020 Hb_019863_020--Hb_000179_160 Hb_019863_020--Hb_007218_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0217255 0.0266466 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0663853 0 0 0 0

CAGE analysis