Hb_022973_010

Information

Type -
Description -
Location Contig22973: 1400-2479
Sequence    

Annotation

kegg
ID pop:POPTR_0019s12290g
description POPTRDRAFT_780716; hypothetical protein
nr
ID XP_012088406.1
description PREDICTED: trans-resveratrol di-O-methyltransferase-like [Jatropha curcas]
swissprot
ID B6VJS4
description Trans-resveratrol di-O-methyltransferase OS=Vitis vinifera GN=ROMT PE=1 SV=2
trembl
ID B9IQS3
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s12290g PE=4 SV=2
Gene Ontology
ID GO:0016206
description trans-resveratrol di-o-methyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_022973_010 0.0 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Jatropha curcas]
2 Hb_025623_010 0.1141704449 - - -
3 Hb_000866_400 0.1148456853 - - -
4 Hb_121624_010 0.1216315245 - - PREDICTED: uncharacterized protein LOC105634410 [Jatropha curcas]
5 Hb_011519_040 0.1223288626 - - hypothetical protein POPTR_0015s04770g [Populus trichocarpa]
6 Hb_011501_020 0.1226225334 - - PREDICTED: uncharacterized protein LOC105648929 [Jatropha curcas]
7 Hb_000300_650 0.1304196717 - - PREDICTED: arabinogalactan peptide 13-like [Jatropha curcas]
8 Hb_002370_020 0.1326341912 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
9 Hb_003371_280 0.1391260292 - - unnamed protein product [Vitis vinifera]
10 Hb_000749_280 0.1422382697 - - PREDICTED: uncharacterized protein LOC105138169 [Populus euphratica]
11 Hb_091236_010 0.1430666358 - - hypothetical protein POPTR_0019s12290g [Populus trichocarpa]
12 Hb_000377_130 0.1450866131 - - hypothetical protein POPTR_0016s00790g [Populus trichocarpa]
13 Hb_006755_030 0.145421565 - - BURP domain-containing protein, putative [Theobroma cacao]
14 Hb_000620_050 0.1480774405 - - PREDICTED: uncharacterized protein LOC105649924 [Jatropha curcas]
15 Hb_003688_120 0.1484625586 - - PREDICTED: uncharacterized protein LOC105350793 [Fragaria vesca subsp. vesca]
16 Hb_014102_010 0.1490478297 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
17 Hb_000343_090 0.1515704112 transcription factor TF Family: OFP conserved hypothetical protein [Ricinus communis]
18 Hb_005207_040 0.1566769355 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2-like [Cicer arietinum]
19 Hb_184074_010 0.1590092607 - - PREDICTED: uncharacterized protein LOC105639054 [Jatropha curcas]
20 Hb_000806_010 0.1661769961 - - PREDICTED: hevamine-A-like [Jatropha curcas]

Gene co-expression network

sample Hb_022973_010 Hb_022973_010 Hb_025623_010 Hb_025623_010 Hb_022973_010--Hb_025623_010 Hb_000866_400 Hb_000866_400 Hb_022973_010--Hb_000866_400 Hb_121624_010 Hb_121624_010 Hb_022973_010--Hb_121624_010 Hb_011519_040 Hb_011519_040 Hb_022973_010--Hb_011519_040 Hb_011501_020 Hb_011501_020 Hb_022973_010--Hb_011501_020 Hb_000300_650 Hb_000300_650 Hb_022973_010--Hb_000300_650 Hb_025623_010--Hb_011501_020 Hb_025623_010--Hb_000866_400 Hb_002370_020 Hb_002370_020 Hb_025623_010--Hb_002370_020 Hb_025623_010--Hb_121624_010 Hb_149507_010 Hb_149507_010 Hb_025623_010--Hb_149507_010 Hb_001269_660 Hb_001269_660 Hb_025623_010--Hb_001269_660 Hb_000866_400--Hb_002370_020 Hb_000866_400--Hb_011501_020 Hb_000620_050 Hb_000620_050 Hb_000866_400--Hb_000620_050 Hb_031579_010 Hb_031579_010 Hb_000866_400--Hb_031579_010 Hb_000866_400--Hb_149507_010 Hb_002245_060 Hb_002245_060 Hb_121624_010--Hb_002245_060 Hb_121624_010--Hb_001269_660 Hb_121624_010--Hb_011501_020 Hb_001408_200 Hb_001408_200 Hb_121624_010--Hb_001408_200 Hb_000402_060 Hb_000402_060 Hb_121624_010--Hb_000402_060 Hb_000377_130 Hb_000377_130 Hb_011519_040--Hb_000377_130 Hb_186765_010 Hb_186765_010 Hb_011519_040--Hb_186765_010 Hb_006755_030 Hb_006755_030 Hb_011519_040--Hb_006755_030 Hb_091236_010 Hb_091236_010 Hb_011519_040--Hb_091236_010 Hb_011519_040--Hb_000620_050 Hb_011519_040--Hb_001408_200 Hb_000343_090 Hb_000343_090 Hb_011501_020--Hb_000343_090 Hb_011501_020--Hb_002245_060 Hb_005622_040 Hb_005622_040 Hb_011501_020--Hb_005622_040 Hb_000300_650--Hb_002370_020 Hb_003371_280 Hb_003371_280 Hb_000300_650--Hb_003371_280 Hb_000014_200 Hb_000014_200 Hb_000300_650--Hb_000014_200 Hb_169960_010 Hb_169960_010 Hb_000300_650--Hb_169960_010 Hb_000034_060 Hb_000034_060 Hb_000300_650--Hb_000034_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.151488 2.08932 0.0483481 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.397964 2.01664

CAGE analysis