Hb_023647_040

Information

Type -
Description -
Location Contig23647: 25859-30513
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa022673mg
description hypothetical protein
nr
ID XP_007220718.1
description hypothetical protein PRUPE_ppa022673mg [Prunus persica]
swissprot
ID P0CT39
description Transposon Tf2-6 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-6 PE=3 SV=1
trembl
ID M5X787
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022673mg PE=4 SV=1
Gene Ontology
ID GO:0003676
description dna rna polymerases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_023647_040 0.0 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
2 Hb_181975_010 0.2126122704 - - PREDICTED: probable disease resistance protein At4g27220 [Populus euphratica]
3 Hb_001396_170 0.2207103715 - - unnamed protein product [Vitis vinifera]
4 Hb_001247_230 0.2240087707 - - nucleic acid binding protein, putative [Ricinus communis]
5 Hb_001504_190 0.2266016717 - - double-stranded RNA binding protein, putative [Ricinus communis]
6 Hb_001999_250 0.2315350575 - - PREDICTED: uncharacterized protein LOC105133073 isoform X1 [Populus euphratica]
7 Hb_002783_050 0.2343142941 - - zinc finger protein, putative [Ricinus communis]
8 Hb_026437_010 0.2353573866 - - -
9 Hb_001301_190 0.2423828887 - - -
10 Hb_075449_020 0.2475917335 - - PREDICTED: uncharacterized protein LOC105633096 [Jatropha curcas]
11 Hb_000003_390 0.2513146366 - - hypothetical protein POPTR_0003s20040g [Populus trichocarpa]
12 Hb_002804_050 0.2528009993 - - PREDICTED: uncharacterized protein LOC105628258 [Jatropha curcas]
13 Hb_021888_150 0.2545776837 - - -
14 Hb_009355_030 0.255154378 - - conserved hypothetical protein [Ricinus communis]
15 Hb_003106_150 0.2583938356 - - PREDICTED: U-box domain-containing protein 38-like [Jatropha curcas]
16 Hb_025306_010 0.2596699643 transcription factor TF Family: MYB-related syringolide-induced protein 1-3-1B [Populus trichocarpa]
17 Hb_002928_160 0.2613412378 - - PREDICTED: U-box domain-containing protein 15 [Jatropha curcas]
18 Hb_006588_090 0.2618723124 - - PREDICTED: uncharacterized protein At4g28440 [Jatropha curcas]
19 Hb_128376_010 0.2628572145 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
20 Hb_002326_070 0.2636513193 - - ent-kaurene oxidase, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_023647_040 Hb_023647_040 Hb_181975_010 Hb_181975_010 Hb_023647_040--Hb_181975_010 Hb_001396_170 Hb_001396_170 Hb_023647_040--Hb_001396_170 Hb_001247_230 Hb_001247_230 Hb_023647_040--Hb_001247_230 Hb_001504_190 Hb_001504_190 Hb_023647_040--Hb_001504_190 Hb_001999_250 Hb_001999_250 Hb_023647_040--Hb_001999_250 Hb_002783_050 Hb_002783_050 Hb_023647_040--Hb_002783_050 Hb_007257_050 Hb_007257_050 Hb_181975_010--Hb_007257_050 Hb_001907_100 Hb_001907_100 Hb_181975_010--Hb_001907_100 Hb_000003_390 Hb_000003_390 Hb_181975_010--Hb_000003_390 Hb_031089_030 Hb_031089_030 Hb_181975_010--Hb_031089_030 Hb_007978_020 Hb_007978_020 Hb_181975_010--Hb_007978_020 Hb_001493_010 Hb_001493_010 Hb_181975_010--Hb_001493_010 Hb_062585_010 Hb_062585_010 Hb_001396_170--Hb_062585_010 Hb_001396_170--Hb_181975_010 Hb_000574_150 Hb_000574_150 Hb_001396_170--Hb_000574_150 Hb_001396_170--Hb_007978_020 Hb_001396_170--Hb_000003_390 Hb_001247_230--Hb_001999_250 Hb_002849_080 Hb_002849_080 Hb_001247_230--Hb_002849_080 Hb_148209_020 Hb_148209_020 Hb_001247_230--Hb_148209_020 Hb_000265_250 Hb_000265_250 Hb_001247_230--Hb_000265_250 Hb_002609_010 Hb_002609_010 Hb_001247_230--Hb_002609_010 Hb_000116_570 Hb_000116_570 Hb_001247_230--Hb_000116_570 Hb_144824_010 Hb_144824_010 Hb_001504_190--Hb_144824_010 Hb_002477_150 Hb_002477_150 Hb_001504_190--Hb_002477_150 Hb_000449_050 Hb_000449_050 Hb_001504_190--Hb_000449_050 Hb_000003_340 Hb_000003_340 Hb_001504_190--Hb_000003_340 Hb_009028_030 Hb_009028_030 Hb_001504_190--Hb_009028_030 Hb_001504_190--Hb_001999_250 Hb_003349_010 Hb_003349_010 Hb_001999_250--Hb_003349_010 Hb_001999_250--Hb_000265_250 Hb_075449_020 Hb_075449_020 Hb_001999_250--Hb_075449_020 Hb_001999_250--Hb_002849_080 Hb_002783_050--Hb_000116_570 Hb_002783_050--Hb_001247_230 Hb_002804_050 Hb_002804_050 Hb_002783_050--Hb_002804_050 Hb_010883_080 Hb_010883_080 Hb_002783_050--Hb_010883_080 Hb_006615_100 Hb_006615_100 Hb_002783_050--Hb_006615_100 Hb_000281_010 Hb_000281_010 Hb_002783_050--Hb_000281_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0607799 0.0667271 0.0139928 0 0.0230747 0.0323723
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0104467 0.00822125 0 0.013023 0

CAGE analysis