Hb_025432_010

Information

Type -
Description -
Location Contig25432: 3310-5769
Sequence    

Annotation

kegg
ID rcu:RCOM_0519620
description ATP binding protein, putative (EC:2.7.11.25 1.3.1.74)
nr
ID KDP21156.1
description hypothetical protein JCGZ_21627 [Jatropha curcas]
swissprot
ID C0LGN2
description Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana GN=LRR-RLK PE=2 SV=1
trembl
ID A0A067JBH6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21627 PE=3 SV=1
Gene Ontology
ID GO:0005515
description probable lrr receptor-like serine threonine-protein kinase at1g07650 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_025432_010 0.0 - - hypothetical protein JCGZ_21627 [Jatropha curcas]
2 Hb_010174_190 0.0938516116 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator ARR11-like [Jatropha curcas]
3 Hb_006241_010 0.0987029764 desease resistance Gene Name: NB-ARC Disease resistance protein RFL1, putative [Ricinus communis]
4 Hb_064985_010 0.1139580748 - - Leucine-rich repeat transmembrane protein kinase, putative [Theobroma cacao]
5 Hb_001008_110 0.1169480021 - - -
6 Hb_022501_020 0.118810235 - - AMP dependent CoA ligase, putative [Ricinus communis]
7 Hb_042202_020 0.1235954428 - - Eukaryotic release factor 1-3 isoform 1 [Theobroma cacao]
8 Hb_033234_010 0.1256970732 desease resistance Gene Name: LRR_8 Disease resistance protein RPP8 [Theobroma cacao]
9 Hb_000527_140 0.1264799355 transcription factor TF Family: GRAS Chitin-inducible gibberellin-responsive protein, putative [Ricinus communis]
10 Hb_002660_040 0.129406193 - - PREDICTED: CASP-like protein 5A1 isoform X1 [Jatropha curcas]
11 Hb_003142_060 0.1336802923 - - PREDICTED: glutamate synthase 1 [NADH], chloroplastic isoform X1 [Jatropha curcas]
12 Hb_000540_040 0.1343196998 - - PREDICTED: chitinase 2 [Amborella trichopoda]
13 Hb_000020_030 0.1348812607 - - protein binding protein, putative [Ricinus communis]
14 Hb_002928_120 0.135842514 - - 1,4-alpha-glucan branching enzyme [Manihot esculenta]
15 Hb_002928_180 0.1370837161 - - catalase CAT1 [Manihot esculenta]
16 Hb_000793_040 0.1372198138 - - PREDICTED: transcription factor LHW [Jatropha curcas]
17 Hb_002833_020 0.1417597743 desease resistance Gene Name: LRR_4 PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
18 Hb_003579_040 0.1423774051 - - PREDICTED: monoacylglycerol lipase ABHD6 [Jatropha curcas]
19 Hb_003025_150 0.1464867126 - - conserved hypothetical protein [Ricinus communis]
20 Hb_002003_040 0.1505265614 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_025432_010 Hb_025432_010 Hb_010174_190 Hb_010174_190 Hb_025432_010--Hb_010174_190 Hb_006241_010 Hb_006241_010 Hb_025432_010--Hb_006241_010 Hb_064985_010 Hb_064985_010 Hb_025432_010--Hb_064985_010 Hb_001008_110 Hb_001008_110 Hb_025432_010--Hb_001008_110 Hb_022501_020 Hb_022501_020 Hb_025432_010--Hb_022501_020 Hb_042202_020 Hb_042202_020 Hb_025432_010--Hb_042202_020 Hb_010174_190--Hb_064985_010 Hb_010174_190--Hb_001008_110 Hb_010174_190--Hb_022501_020 Hb_002928_180 Hb_002928_180 Hb_010174_190--Hb_002928_180 Hb_068332_010 Hb_068332_010 Hb_010174_190--Hb_068332_010 Hb_006241_010--Hb_022501_020 Hb_008226_120 Hb_008226_120 Hb_006241_010--Hb_008226_120 Hb_006241_010--Hb_064985_010 Hb_002660_040 Hb_002660_040 Hb_006241_010--Hb_002660_040 Hb_012807_060 Hb_012807_060 Hb_006241_010--Hb_012807_060 Hb_064985_010--Hb_001008_110 Hb_007894_030 Hb_007894_030 Hb_064985_010--Hb_007894_030 Hb_006634_090 Hb_006634_090 Hb_064985_010--Hb_006634_090 Hb_001636_010 Hb_001636_010 Hb_064985_010--Hb_001636_010 Hb_000527_140 Hb_000527_140 Hb_064985_010--Hb_000527_140 Hb_005649_010 Hb_005649_010 Hb_064985_010--Hb_005649_010 Hb_000417_280 Hb_000417_280 Hb_001008_110--Hb_000417_280 Hb_002833_020 Hb_002833_020 Hb_001008_110--Hb_002833_020 Hb_003142_060 Hb_003142_060 Hb_001008_110--Hb_003142_060 Hb_032717_010 Hb_032717_010 Hb_001008_110--Hb_032717_010 Hb_001008_110--Hb_042202_020 Hb_022501_020--Hb_012807_060 Hb_003453_030 Hb_003453_030 Hb_022501_020--Hb_003453_030 Hb_002551_090 Hb_002551_090 Hb_022501_020--Hb_002551_090 Hb_004044_030 Hb_004044_030 Hb_022501_020--Hb_004044_030 Hb_006594_060 Hb_006594_060 Hb_022501_020--Hb_006594_060 Hb_033234_010 Hb_033234_010 Hb_042202_020--Hb_033234_010 Hb_001268_300 Hb_001268_300 Hb_042202_020--Hb_001268_300 Hb_042202_020--Hb_002833_020 Hb_042202_020--Hb_000527_140 Hb_042202_020--Hb_003142_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.468192 13.8489 4.87746 11.9185 0.272732 1.01915
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.274348 0.287523 1.2691 14.4487 4.91886

CAGE analysis