Hb_026048_100

Information

Type -
Description -
Location Contig26048: 117427-123810
Sequence    

Annotation

kegg
ID rcu:RCOM_1689410
description ATP binding protein, putative (EC:3.6.4.3)
nr
ID XP_012086803.1
description PREDICTED: putative cell division cycle ATPase [Jatropha curcas]
swissprot
ID Q9P7J5
description Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC24B10.10c PE=3 SV=1
trembl
ID B9RCJ8
description ATP binding protein, putative OS=Ricinus communis GN=RCOM_1689410 PE=3 SV=1
Gene Ontology
ID GO:0005524
description cell division cycle atpase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_026048_100 0.0 - - PREDICTED: putative cell division cycle ATPase [Jatropha curcas]
2 Hb_003638_030 0.0818453395 - - PREDICTED: uncharacterized protein LOC105645805 [Jatropha curcas]
3 Hb_066807_010 0.0824035058 - - PREDICTED: uncharacterized protein LOC105628412 [Jatropha curcas]
4 Hb_006602_020 0.0880917973 - - unknown [Medicago truncatula]
5 Hb_000700_090 0.0894873128 - - protein with unknown function [Ricinus communis]
6 Hb_000057_060 0.0913623015 - - PREDICTED: uncharacterized protein LOC105634990 isoform X4 [Jatropha curcas]
7 Hb_000172_400 0.0919187681 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
8 Hb_002207_100 0.0943979628 - - PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Jatropha curcas]
9 Hb_001902_050 0.0954520637 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105648450 [Jatropha curcas]
10 Hb_011174_070 0.0979344129 - - PREDICTED: pentatricopeptide repeat-containing protein At5g06540-like [Jatropha curcas]
11 Hb_002007_270 0.0983020389 - - PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g05340-like [Jatropha curcas]
12 Hb_003404_030 0.1002790363 - - PREDICTED: monogalactosyldiacylglycerol synthase 2, chloroplastic-like isoform X1 [Jatropha curcas]
13 Hb_098709_010 0.1018508038 - - PREDICTED: protein argonaute 1 [Jatropha curcas]
14 Hb_004126_010 0.1019434939 - - PREDICTED: serine/threonine-protein kinase HT1 [Jatropha curcas]
15 Hb_162275_010 0.1020363753 - - -
16 Hb_000365_360 0.1034333543 - - PREDICTED: RING finger and transmembrane domain-containing protein 2 isoform X1 [Jatropha curcas]
17 Hb_007441_350 0.1043918193 - - PREDICTED: probable purine permease 11 [Jatropha curcas]
18 Hb_009510_030 0.1046872371 - - PREDICTED: phosphoinositide phospholipase C 2-like [Jatropha curcas]
19 Hb_127979_010 0.1050244222 - - PREDICTED: uncharacterized protein LOC105629383 [Jatropha curcas]
20 Hb_007760_030 0.1050934524 transcription factor TF Family: M-type hypothetical protein JCGZ_15623 [Jatropha curcas]

Gene co-expression network

sample Hb_026048_100 Hb_026048_100 Hb_003638_030 Hb_003638_030 Hb_026048_100--Hb_003638_030 Hb_066807_010 Hb_066807_010 Hb_026048_100--Hb_066807_010 Hb_006602_020 Hb_006602_020 Hb_026048_100--Hb_006602_020 Hb_000700_090 Hb_000700_090 Hb_026048_100--Hb_000700_090 Hb_000057_060 Hb_000057_060 Hb_026048_100--Hb_000057_060 Hb_000172_400 Hb_000172_400 Hb_026048_100--Hb_000172_400 Hb_002207_100 Hb_002207_100 Hb_003638_030--Hb_002207_100 Hb_000805_090 Hb_000805_090 Hb_003638_030--Hb_000805_090 Hb_003638_030--Hb_000172_400 Hb_162275_010 Hb_162275_010 Hb_003638_030--Hb_162275_010 Hb_003638_030--Hb_000700_090 Hb_002681_140 Hb_002681_140 Hb_066807_010--Hb_002681_140 Hb_004852_030 Hb_004852_030 Hb_066807_010--Hb_004852_030 Hb_032531_030 Hb_032531_030 Hb_066807_010--Hb_032531_030 Hb_000365_360 Hb_000365_360 Hb_066807_010--Hb_000365_360 Hb_001902_050 Hb_001902_050 Hb_066807_010--Hb_001902_050 Hb_006602_020--Hb_000700_090 Hb_006602_010 Hb_006602_010 Hb_006602_020--Hb_006602_010 Hb_005539_290 Hb_005539_290 Hb_006602_020--Hb_005539_290 Hb_000387_080 Hb_000387_080 Hb_006602_020--Hb_000387_080 Hb_005779_100 Hb_005779_100 Hb_006602_020--Hb_005779_100 Hb_006602_020--Hb_001902_050 Hb_000700_090--Hb_001902_050 Hb_000152_140 Hb_000152_140 Hb_000700_090--Hb_000152_140 Hb_004735_010 Hb_004735_010 Hb_000700_090--Hb_004735_010 Hb_098709_010 Hb_098709_010 Hb_000700_090--Hb_098709_010 Hb_000696_110 Hb_000696_110 Hb_000700_090--Hb_000696_110 Hb_001433_170 Hb_001433_170 Hb_000057_060--Hb_001433_170 Hb_009510_030 Hb_009510_030 Hb_000057_060--Hb_009510_030 Hb_003404_030 Hb_003404_030 Hb_000057_060--Hb_003404_030 Hb_000771_140 Hb_000771_140 Hb_000057_060--Hb_000771_140 Hb_127979_010 Hb_127979_010 Hb_000057_060--Hb_127979_010 Hb_002506_010 Hb_002506_010 Hb_000057_060--Hb_002506_010 Hb_000172_400--Hb_002207_100 Hb_000784_090 Hb_000784_090 Hb_000172_400--Hb_000784_090 Hb_001454_060 Hb_001454_060 Hb_000172_400--Hb_001454_060 Hb_000340_510 Hb_000340_510 Hb_000172_400--Hb_000340_510 Hb_001030_120 Hb_001030_120 Hb_000172_400--Hb_001030_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.762045 0.182107 0.104915 0.0873373 0.921775 1.25977
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.622546 0.653169 0.960219 0.135072 0.0578751

CAGE analysis