Hb_026053_030

Information

Type -
Description -
Location Contig26053: 28512-31299
Sequence    

Annotation

kegg
ID gmx:102669274
description uncharacterized LOC102669274
nr
ID XP_012066591.1
description PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID W9QD67
description Uncharacterized protein OS=Morus notabilis GN=L484_012687 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_026053_030 0.0 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
2 Hb_000417_150 0.0679965926 - - hypothetical protein JCGZ_21586 [Jatropha curcas]
3 Hb_000044_050 0.0935857402 - - PREDICTED: amino acid permease 6-like isoform X1 [Jatropha curcas]
4 Hb_004007_230 0.1037116108 - - PREDICTED: putative formamidase C869.04 isoform X1 [Jatropha curcas]
5 Hb_031949_010 0.1129416843 - - -
6 Hb_011344_140 0.1142998208 - - PREDICTED: geraniol 8-hydroxylase-like [Jatropha curcas]
7 Hb_001907_020 0.1280918043 - - PREDICTED: receptor-like protein 12 [Vitis vinifera]
8 Hb_008195_020 0.1321103564 - - Vacuolar-processing enzyme precursor [Ricinus communis]
9 Hb_000236_430 0.1340976004 - - PREDICTED: uncharacterized protein LOC105633302 [Jatropha curcas]
10 Hb_002045_220 0.1346410758 - - PREDICTED: uncharacterized protein LOC105649919 isoform X1 [Jatropha curcas]
11 Hb_001357_360 0.1364961345 - - zinc finger protein, putative [Ricinus communis]
12 Hb_000377_160 0.1366548941 - - PREDICTED: oligopeptide transporter 3 [Jatropha curcas]
13 Hb_005470_040 0.1399462588 - - hypothetical protein POPTR_0015s09760g [Populus trichocarpa]
14 Hb_000649_280 0.1420472492 - - PREDICTED: F-box protein PP2-B10-like [Pyrus x bretschneideri]
15 Hb_028872_100 0.1523610821 - - PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
16 Hb_000767_010 0.1566656772 - - PREDICTED: geraniol 8-hydroxylase-like isoform X2 [Solanum lycopersicum]
17 Hb_001971_020 0.1573900964 - - PREDICTED: alpha-dioxygenase 2 [Populus euphratica]
18 Hb_048476_070 0.1577746634 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002818_070 0.1577821611 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
20 Hb_067345_020 0.158850265 - - PREDICTED: uncharacterized protein LOC105632434 [Jatropha curcas]

Gene co-expression network

sample Hb_026053_030 Hb_026053_030 Hb_000417_150 Hb_000417_150 Hb_026053_030--Hb_000417_150 Hb_000044_050 Hb_000044_050 Hb_026053_030--Hb_000044_050 Hb_004007_230 Hb_004007_230 Hb_026053_030--Hb_004007_230 Hb_031949_010 Hb_031949_010 Hb_026053_030--Hb_031949_010 Hb_011344_140 Hb_011344_140 Hb_026053_030--Hb_011344_140 Hb_001907_020 Hb_001907_020 Hb_026053_030--Hb_001907_020 Hb_028872_100 Hb_028872_100 Hb_000417_150--Hb_028872_100 Hb_000417_150--Hb_004007_230 Hb_000417_150--Hb_031949_010 Hb_000417_150--Hb_000044_050 Hb_001411_100 Hb_001411_100 Hb_000417_150--Hb_001411_100 Hb_008195_020 Hb_008195_020 Hb_000044_050--Hb_008195_020 Hb_001989_080 Hb_001989_080 Hb_000044_050--Hb_001989_080 Hb_000044_050--Hb_004007_230 Hb_004143_140 Hb_004143_140 Hb_000044_050--Hb_004143_140 Hb_001357_360 Hb_001357_360 Hb_004007_230--Hb_001357_360 Hb_004007_230--Hb_004143_140 Hb_003077_140 Hb_003077_140 Hb_004007_230--Hb_003077_140 Hb_000767_010 Hb_000767_010 Hb_004007_230--Hb_000767_010 Hb_005470_040 Hb_005470_040 Hb_031949_010--Hb_005470_040 Hb_000377_160 Hb_000377_160 Hb_031949_010--Hb_000377_160 Hb_001856_110 Hb_001856_110 Hb_031949_010--Hb_001856_110 Hb_000009_390 Hb_000009_390 Hb_031949_010--Hb_000009_390 Hb_002045_220 Hb_002045_220 Hb_011344_140--Hb_002045_220 Hb_011344_140--Hb_001907_020 Hb_010921_060 Hb_010921_060 Hb_011344_140--Hb_010921_060 Hb_000465_380 Hb_000465_380 Hb_011344_140--Hb_000465_380 Hb_000412_090 Hb_000412_090 Hb_011344_140--Hb_000412_090 Hb_000649_280 Hb_000649_280 Hb_011344_140--Hb_000649_280 Hb_022108_010 Hb_022108_010 Hb_001907_020--Hb_022108_010 Hb_001907_020--Hb_000649_280 Hb_004055_100 Hb_004055_100 Hb_001907_020--Hb_004055_100 Hb_001907_020--Hb_002045_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.600805 0.0840635 0.106 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.236579 0.474494

CAGE analysis