Hb_026144_040

Information

Type -
Description -
Location Contig26144: 27431-29091
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_026144_040 0.0 - - -
2 Hb_007237_080 0.0637639578 - - amino acid transporter, putative [Ricinus communis]
3 Hb_008598_010 0.0641928317 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
4 Hb_000162_070 0.0672082393 - - phospholipase C, putative [Ricinus communis]
5 Hb_000045_080 0.0810605902 - - amino acid transporter, putative [Ricinus communis]
6 Hb_002598_020 0.0910574017 - - PREDICTED: sugar transporter ERD6-like 5 [Populus euphratica]
7 Hb_002151_020 0.0941392127 - - PREDICTED: uncharacterized protein LOC105637945 [Jatropha curcas]
8 Hb_017862_030 0.0947879438 - - PREDICTED: proteasome assembly chaperone 4 [Jatropha curcas]
9 Hb_002370_050 0.1002626972 - - hypothetical protein JCGZ_18849 [Jatropha curcas]
10 Hb_000384_020 0.1027472432 - - sucrose phosphate syntase, putative [Ricinus communis]
11 Hb_014361_040 0.1035720656 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
12 Hb_001117_180 0.1069148997 - - PREDICTED: uncharacterized protein LOC105629703 isoform X1 [Jatropha curcas]
13 Hb_002902_040 0.1134680339 - - PREDICTED: peroxidase 51 [Jatropha curcas]
14 Hb_001269_400 0.114257585 - - cinnamoyl-CoA reductase [Hevea brasiliensis]
15 Hb_000069_540 0.1185283831 - - PREDICTED: hydroquinone glucosyltransferase [Jatropha curcas]
16 Hb_144703_010 0.1192071465 - - Phospholipase A 2A, IIA,PLA2A [Theobroma cacao]
17 Hb_000453_290 0.1192252695 - - PREDICTED: dr1-associated corepressor-like [Jatropha curcas]
18 Hb_002811_110 0.119676899 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
19 Hb_000991_080 0.1215475298 - - kinase, putative [Ricinus communis]
20 Hb_154038_040 0.12260997 - - nutrient reservoir, putative [Ricinus communis]

Gene co-expression network

sample Hb_026144_040 Hb_026144_040 Hb_007237_080 Hb_007237_080 Hb_026144_040--Hb_007237_080 Hb_008598_010 Hb_008598_010 Hb_026144_040--Hb_008598_010 Hb_000162_070 Hb_000162_070 Hb_026144_040--Hb_000162_070 Hb_000045_080 Hb_000045_080 Hb_026144_040--Hb_000045_080 Hb_002598_020 Hb_002598_020 Hb_026144_040--Hb_002598_020 Hb_002151_020 Hb_002151_020 Hb_026144_040--Hb_002151_020 Hb_002370_050 Hb_002370_050 Hb_007237_080--Hb_002370_050 Hb_007237_080--Hb_000162_070 Hb_001269_400 Hb_001269_400 Hb_007237_080--Hb_001269_400 Hb_002811_110 Hb_002811_110 Hb_007237_080--Hb_002811_110 Hb_000571_060 Hb_000571_060 Hb_007237_080--Hb_000571_060 Hb_008598_010--Hb_000045_080 Hb_008598_010--Hb_002151_020 Hb_144703_010 Hb_144703_010 Hb_008598_010--Hb_144703_010 Hb_008598_010--Hb_000162_070 Hb_000069_540 Hb_000069_540 Hb_008598_010--Hb_000069_540 Hb_000162_070--Hb_000045_080 Hb_000991_080 Hb_000991_080 Hb_000162_070--Hb_000991_080 Hb_000162_070--Hb_002811_110 Hb_017862_030 Hb_017862_030 Hb_000045_080--Hb_017862_030 Hb_000045_080--Hb_002151_020 Hb_000384_020 Hb_000384_020 Hb_000045_080--Hb_000384_020 Hb_000537_090 Hb_000537_090 Hb_002598_020--Hb_000537_090 Hb_002598_020--Hb_000162_070 Hb_000090_020 Hb_000090_020 Hb_002598_020--Hb_000090_020 Hb_002598_020--Hb_008598_010 Hb_001318_230 Hb_001318_230 Hb_002598_020--Hb_001318_230 Hb_002902_040 Hb_002902_040 Hb_002151_020--Hb_002902_040 Hb_002151_020--Hb_001269_400 Hb_019496_040 Hb_019496_040 Hb_002151_020--Hb_019496_040 Hb_000473_100 Hb_000473_100 Hb_002151_020--Hb_000473_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.02526 1.23004 5.08647 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.14114 2.21684

CAGE analysis