Hb_026240_020

Information

Type desease resistance
Description Gene Name: NB-ARC
Location Contig26240: 13040-17425
Sequence    

Annotation

kegg
ID rcu:RCOM_0454760
description hypothetical protein
nr
ID XP_012065252.1
description PREDICTED: putative disease resistance protein At1g59780 [Jatropha curcas]
swissprot
ID Q9M667
description Disease resistance protein RPP13 OS=Arabidopsis thaliana GN=RPP13 PE=2 SV=2
trembl
ID A0A067L630
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20877 PE=4 SV=1
Gene Ontology
ID GO:0000166
description disease resistance protein at1g59780

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_026240_020 0.0 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At1g59780 [Jatropha curcas]
2 Hb_000977_030 0.0572995756 - - unnamed protein product [Vitis vinifera]
3 Hb_003092_020 0.070841196 - - PREDICTED: heptahelical transmembrane protein 1 [Jatropha curcas]
4 Hb_005892_040 0.0734282149 - - hypothetical protein JCGZ_02368 [Jatropha curcas]
5 Hb_003454_050 0.0841690727 - - PREDICTED: probable methyltransferase PMT14 [Jatropha curcas]
6 Hb_005730_110 0.0860207409 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
7 Hb_003506_010 0.089268126 - - hypothetical protein JCGZ_01146 [Jatropha curcas]
8 Hb_001946_200 0.0942334319 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
9 Hb_004162_320 0.0946086861 - - PREDICTED: uncharacterized protein LOC105628009 isoform X1 [Jatropha curcas]
10 Hb_039075_020 0.0956682618 - - PREDICTED: uncharacterized protein LOC103331245 [Prunus mume]
11 Hb_001366_290 0.0957206634 - - Alpha-expansin 1 precursor, putative [Ricinus communis]
12 Hb_000365_430 0.1006214724 - - PREDICTED: BTB/POZ domain-containing protein At3g08570-like [Jatropha curcas]
13 Hb_000162_200 0.1022775519 - - PREDICTED: uncharacterized protein LOC105641759 isoform X2 [Jatropha curcas]
14 Hb_001936_180 0.102638217 - - PREDICTED: protein NSP-INTERACTING KINASE 3 [Jatropha curcas]
15 Hb_007290_050 0.1034212395 - - PREDICTED: uncharacterized protein LOC105629472 isoform X1 [Jatropha curcas]
16 Hb_106089_010 0.1051563827 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
17 Hb_002490_060 0.1055785929 - - PREDICTED: uncharacterized protein LOC105638743 [Jatropha curcas]
18 Hb_022092_110 0.1067402491 - - PREDICTED: probable protein phosphatase 2C 52 [Jatropha curcas]
19 Hb_000627_040 0.1071293937 - - leucine-rich repeat protein, putative [Ricinus communis]
20 Hb_021576_130 0.1073056283 - - PREDICTED: chorismate mutase 2 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_026240_020 Hb_026240_020 Hb_000977_030 Hb_000977_030 Hb_026240_020--Hb_000977_030 Hb_003092_020 Hb_003092_020 Hb_026240_020--Hb_003092_020 Hb_005892_040 Hb_005892_040 Hb_026240_020--Hb_005892_040 Hb_003454_050 Hb_003454_050 Hb_026240_020--Hb_003454_050 Hb_005730_110 Hb_005730_110 Hb_026240_020--Hb_005730_110 Hb_003506_010 Hb_003506_010 Hb_026240_020--Hb_003506_010 Hb_000290_030 Hb_000290_030 Hb_000977_030--Hb_000290_030 Hb_003580_050 Hb_003580_050 Hb_000977_030--Hb_003580_050 Hb_000162_200 Hb_000162_200 Hb_000977_030--Hb_000162_200 Hb_000977_030--Hb_005892_040 Hb_002724_010 Hb_002724_010 Hb_000977_030--Hb_002724_010 Hb_000365_430 Hb_000365_430 Hb_003092_020--Hb_000365_430 Hb_004117_280 Hb_004117_280 Hb_003092_020--Hb_004117_280 Hb_142026_010 Hb_142026_010 Hb_003092_020--Hb_142026_010 Hb_000098_260 Hb_000098_260 Hb_003092_020--Hb_000098_260 Hb_003092_020--Hb_003454_050 Hb_005892_040--Hb_003506_010 Hb_004162_320 Hb_004162_320 Hb_005892_040--Hb_004162_320 Hb_001405_040 Hb_001405_040 Hb_005892_040--Hb_001405_040 Hb_020805_070 Hb_020805_070 Hb_005892_040--Hb_020805_070 Hb_106089_010 Hb_106089_010 Hb_003454_050--Hb_106089_010 Hb_002205_150 Hb_002205_150 Hb_003454_050--Hb_002205_150 Hb_004228_070 Hb_004228_070 Hb_003454_050--Hb_004228_070 Hb_003454_050--Hb_142026_010 Hb_002902_040 Hb_002902_040 Hb_003454_050--Hb_002902_040 Hb_000627_040 Hb_000627_040 Hb_005730_110--Hb_000627_040 Hb_012404_020 Hb_012404_020 Hb_005730_110--Hb_012404_020 Hb_000418_170 Hb_000418_170 Hb_005730_110--Hb_000418_170 Hb_022092_110 Hb_022092_110 Hb_005730_110--Hb_022092_110 Hb_004592_010 Hb_004592_010 Hb_005730_110--Hb_004592_010 Hb_003506_010--Hb_004162_320 Hb_002078_320 Hb_002078_320 Hb_003506_010--Hb_002078_320 Hb_003506_010--Hb_020805_070 Hb_004855_080 Hb_004855_080 Hb_003506_010--Hb_004855_080 Hb_003506_010--Hb_000162_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0081807 1.63677 4.92342 5.36593 0.00765711 0.0231737
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.74153 3.53738

CAGE analysis