Hb_026437_010

Information

Type -
Description -
Location Contig26437: 209-907
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_026437_010 0.0 - - -
2 Hb_000260_090 0.1504107697 - - PREDICTED: ubiquitin-conjugating enzyme E2 28 [Gossypium raimondii]
3 Hb_031089_030 0.1505538969 - - ubiquitin-conjugating enzyme E2 28 [Arabidopsis thaliana]
4 Hb_004096_080 0.1564546769 - - PREDICTED: IST1 homolog [Jatropha curcas]
5 Hb_084429_010 0.1578691063 - - PREDICTED: probable E3 ubiquitin-protein ligase ARI7 [Populus euphratica]
6 Hb_006588_090 0.1593674594 - - PREDICTED: uncharacterized protein At4g28440 [Jatropha curcas]
7 Hb_002609_010 0.1624557314 - - PREDICTED: uncharacterized protein LOC105630866 [Jatropha curcas]
8 Hb_006316_070 0.1628260878 transcription factor TF Family: GeBP PREDICTED: mediator-associated protein 1-like [Jatropha curcas]
9 Hb_001247_230 0.1666008969 - - nucleic acid binding protein, putative [Ricinus communis]
10 Hb_002505_040 0.1694794061 - - -
11 Hb_003299_080 0.1702437276 - - PREDICTED: uncharacterized protein LOC105649790 [Jatropha curcas]
12 Hb_148209_020 0.1752919432 - - PREDICTED: SWI/SNF complex subunit SWI3D isoform X1 [Jatropha curcas]
13 Hb_002849_080 0.1777826366 - - PREDICTED: mitogen-activated protein kinase homolog MMK2 [Jatropha curcas]
14 Hb_000375_370 0.1793294617 - - Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor, putative [Ricinus communis]
15 Hb_002078_420 0.1800283846 - - PREDICTED: F-box only protein 6 [Jatropha curcas]
16 Hb_002002_020 0.1808506833 - - Phosphoprotein phosphatase isoform 3 [Theobroma cacao]
17 Hb_000059_040 0.1826066967 - - Uncharacterized protein TCM_020504 [Theobroma cacao]
18 Hb_183510_010 0.1830024247 - - PREDICTED: RPM1-interacting protein 4-like isoform X2 [Jatropha curcas]
19 Hb_009355_030 0.1840693984 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001584_170 0.1884438487 - - neutral/alkaline invertase [Manihot esculenta]

Gene co-expression network

sample Hb_026437_010 Hb_026437_010 Hb_000260_090 Hb_000260_090 Hb_026437_010--Hb_000260_090 Hb_031089_030 Hb_031089_030 Hb_026437_010--Hb_031089_030 Hb_004096_080 Hb_004096_080 Hb_026437_010--Hb_004096_080 Hb_084429_010 Hb_084429_010 Hb_026437_010--Hb_084429_010 Hb_006588_090 Hb_006588_090 Hb_026437_010--Hb_006588_090 Hb_002609_010 Hb_002609_010 Hb_026437_010--Hb_002609_010 Hb_000174_200 Hb_000174_200 Hb_000260_090--Hb_000174_200 Hb_012395_160 Hb_012395_160 Hb_000260_090--Hb_012395_160 Hb_006316_070 Hb_006316_070 Hb_000260_090--Hb_006316_070 Hb_000347_150 Hb_000347_150 Hb_000260_090--Hb_000347_150 Hb_003299_090 Hb_003299_090 Hb_000260_090--Hb_003299_090 Hb_001584_170 Hb_001584_170 Hb_000260_090--Hb_001584_170 Hb_007257_050 Hb_007257_050 Hb_031089_030--Hb_007257_050 Hb_003299_080 Hb_003299_080 Hb_031089_030--Hb_003299_080 Hb_031089_030--Hb_084429_010 Hb_001396_260 Hb_001396_260 Hb_031089_030--Hb_001396_260 Hb_000375_370 Hb_000375_370 Hb_031089_030--Hb_000375_370 Hb_001247_140 Hb_001247_140 Hb_031089_030--Hb_001247_140 Hb_004096_080--Hb_001396_260 Hb_004096_080--Hb_084429_010 Hb_015763_020 Hb_015763_020 Hb_004096_080--Hb_015763_020 Hb_002078_420 Hb_002078_420 Hb_004096_080--Hb_002078_420 Hb_114310_040 Hb_114310_040 Hb_004096_080--Hb_114310_040 Hb_011861_070 Hb_011861_070 Hb_004096_080--Hb_011861_070 Hb_084429_010--Hb_001396_260 Hb_084429_010--Hb_007257_050 Hb_084429_010--Hb_000375_370 Hb_002849_080 Hb_002849_080 Hb_084429_010--Hb_002849_080 Hb_000465_310 Hb_000465_310 Hb_006588_090--Hb_000465_310 Hb_005333_020 Hb_005333_020 Hb_006588_090--Hb_005333_020 Hb_183510_010 Hb_183510_010 Hb_006588_090--Hb_183510_010 Hb_007416_200 Hb_007416_200 Hb_006588_090--Hb_007416_200 Hb_001720_010 Hb_001720_010 Hb_006588_090--Hb_001720_010 Hb_025048_030 Hb_025048_030 Hb_006588_090--Hb_025048_030 Hb_002609_010--Hb_002849_080 Hb_148209_020 Hb_148209_020 Hb_002609_010--Hb_148209_020 Hb_002609_010--Hb_006316_070 Hb_000413_170 Hb_000413_170 Hb_002609_010--Hb_000413_170 Hb_001247_230 Hb_001247_230 Hb_002609_010--Hb_001247_230 Hb_000265_250 Hb_000265_250 Hb_002609_010--Hb_000265_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.93377 2.81526 0.297374 0.111584 1.8539 3.0484
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.986004 0.986411 0.249246 0.834199 0

CAGE analysis