Hb_026527_010

Information

Type -
Description -
Location Contig26527: 4171-5499
Sequence    

Annotation

kegg
ID pop:POPTR_0003s05780g
description POPTRDRAFT_553671; esterase/lipase/thioesterase family protein
nr
ID XP_011040000.1
description PREDICTED: caffeoylshikimate esterase-like [Populus euphratica]
swissprot
ID Q9C942
description Caffeoylshikimate esterase OS=Arabidopsis thaliana GN=CSE PE=1 SV=1
trembl
ID A0A067KZ86
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06210 PE=4 SV=1
Gene Ontology
ID GO:0005886
description caffeoylshikimate esterase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27732: 4197-5496
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_026527_010 0.0 - - PREDICTED: caffeoylshikimate esterase-like [Populus euphratica]
2 Hb_001329_180 0.1212050118 - - S-adenosylmethionine synthetase 1 family protein [Populus trichocarpa]
3 Hb_000696_070 0.1259442233 - - PREDICTED: aspartic proteinase-like protein 1 [Jatropha curcas]
4 Hb_003470_110 0.1276168445 - - unnamed protein product [Vitis vinifera]
5 Hb_020805_140 0.1368563841 - - PREDICTED: F-box/kelch-repeat protein At5g42360-like [Jatropha curcas]
6 Hb_002701_090 0.137245869 - - hypothetical protein POPTR_0017s13430g [Populus trichocarpa]
7 Hb_002781_050 0.1437133081 - - cytochrome B5 isoform 1, putative [Ricinus communis]
8 Hb_031089_020 0.1439506777 - - Nodulation receptor kinase precursor, putative [Ricinus communis]
9 Hb_001369_630 0.1451930902 - - PREDICTED: UDP-glucuronate 4-epimerase 3-like [Jatropha curcas]
10 Hb_000246_130 0.1477307767 - - tubulin alpha chain, putative [Ricinus communis]
11 Hb_147245_010 0.1490393931 - - casein kinase, putative [Ricinus communis]
12 Hb_004055_020 0.1507587724 - - PREDICTED: uncharacterized protein LOC105631433 [Jatropha curcas]
13 Hb_000806_130 0.1513698021 - - Adenosine kinase 2 [Theobroma cacao]
14 Hb_001119_070 0.1514119269 - - methylenetetrahydrofolate reductase, putative [Ricinus communis]
15 Hb_001486_350 0.1536277636 - - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative [Ricinus communis]
16 Hb_000107_350 0.1547735767 - - PREDICTED: uncharacterized protein LOC105635576 [Jatropha curcas]
17 Hb_012707_040 0.1549773989 - - PREDICTED: probable inactive purple acid phosphatase 29 [Jatropha curcas]
18 Hb_011360_110 0.1557459541 - - PREDICTED: UDP-glucose 6-dehydrogenase 1 [Vitis vinifera]
19 Hb_000920_160 0.1568114991 - - annexin [Manihot esculenta]
20 Hb_001922_030 0.1581691743 - - PREDICTED: probable membrane-associated kinase regulator 5 [Jatropha curcas]

Gene co-expression network

sample Hb_026527_010 Hb_026527_010 Hb_001329_180 Hb_001329_180 Hb_026527_010--Hb_001329_180 Hb_000696_070 Hb_000696_070 Hb_026527_010--Hb_000696_070 Hb_003470_110 Hb_003470_110 Hb_026527_010--Hb_003470_110 Hb_020805_140 Hb_020805_140 Hb_026527_010--Hb_020805_140 Hb_002701_090 Hb_002701_090 Hb_026527_010--Hb_002701_090 Hb_002781_050 Hb_002781_050 Hb_026527_010--Hb_002781_050 Hb_000806_130 Hb_000806_130 Hb_001329_180--Hb_000806_130 Hb_001922_030 Hb_001922_030 Hb_001329_180--Hb_001922_030 Hb_000236_190 Hb_000236_190 Hb_001329_180--Hb_000236_190 Hb_030565_100 Hb_030565_100 Hb_001329_180--Hb_030565_100 Hb_000300_420 Hb_000300_420 Hb_001329_180--Hb_000300_420 Hb_000696_070--Hb_002781_050 Hb_000696_070--Hb_000806_130 Hb_001119_070 Hb_001119_070 Hb_000696_070--Hb_001119_070 Hb_001369_630 Hb_001369_630 Hb_000696_070--Hb_001369_630 Hb_001486_350 Hb_001486_350 Hb_000696_070--Hb_001486_350 Hb_031089_020 Hb_031089_020 Hb_003470_110--Hb_031089_020 Hb_000236_180 Hb_000236_180 Hb_003470_110--Hb_000236_180 Hb_098795_030 Hb_098795_030 Hb_003470_110--Hb_098795_030 Hb_006615_230 Hb_006615_230 Hb_003470_110--Hb_006615_230 Hb_084147_010 Hb_084147_010 Hb_003470_110--Hb_084147_010 Hb_003470_110--Hb_030565_100 Hb_000107_350 Hb_000107_350 Hb_020805_140--Hb_000107_350 Hb_069355_010 Hb_069355_010 Hb_020805_140--Hb_069355_010 Hb_025466_020 Hb_025466_020 Hb_020805_140--Hb_025466_020 Hb_000345_080 Hb_000345_080 Hb_020805_140--Hb_000345_080 Hb_008699_030 Hb_008699_030 Hb_020805_140--Hb_008699_030 Hb_002701_090--Hb_001329_180 Hb_000920_160 Hb_000920_160 Hb_002701_090--Hb_000920_160 Hb_002200_070 Hb_002200_070 Hb_002701_090--Hb_002200_070 Hb_001621_100 Hb_001621_100 Hb_002701_090--Hb_001621_100 Hb_002701_090--Hb_000107_350 Hb_003602_020 Hb_003602_020 Hb_002781_050--Hb_003602_020 Hb_001148_100 Hb_001148_100 Hb_002781_050--Hb_001148_100 Hb_001148_090 Hb_001148_090 Hb_002781_050--Hb_001148_090 Hb_002781_050--Hb_001369_630 Hb_048476_060 Hb_048476_060 Hb_002781_050--Hb_048476_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
23.0302 32.0993 60.0545 283.083 4.9051 8.18737
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
52.0934 19.1758 21.2275 59.5282 113.341

CAGE analysis