Hb_026766_010

Information

Type -
Description -
Location Contig26766: 1628-3165
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_026766_010 0.0 - - -
2 Hb_027751_030 0.1945522476 - - -
3 Hb_000284_160 0.2002782405 - - PREDICTED: TMV resistance protein N-like [Jatropha curcas]
4 Hb_003992_120 0.2440557866 - - hypothetical protein MTR_6g089560 [Medicago truncatula]
5 Hb_004584_010 0.2570622468 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
6 Hb_000614_330 0.2582185364 - - hypothetical protein POPTR_0008s18070g [Populus trichocarpa]
7 Hb_000603_240 0.2597243152 - - -
8 Hb_002843_190 0.2603536147 transcription factor TF Family: GRF PREDICTED: growth-regulating factor 7 isoform X1 [Jatropha curcas]
9 Hb_031862_050 0.2677673438 - - Cell division cycle protein, putative [Ricinus communis]
10 Hb_027751_040 0.277738274 - - PREDICTED: uncharacterized protein LOC105637052 [Jatropha curcas]
11 Hb_002094_020 0.2864139042 - - PREDICTED: alpha-copaene synthase-like [Jatropha curcas]
12 Hb_002928_100 0.2883558023 - - -
13 Hb_001135_230 0.2914578105 - - PREDICTED: protein REVEILLE 6-like isoform X3 [Gossypium raimondii]
14 Hb_000205_170 0.3170332384 - - PREDICTED: uncharacterized protein LOC103926801 [Pyrus x bretschneideri]
15 Hb_010128_110 0.320443925 - - PREDICTED: uncharacterized protein LOC105632071 [Jatropha curcas]
16 Hb_010812_090 0.3211251396 - - PREDICTED: serine/threonine-protein kinase AtPK2/AtPK19-like [Jatropha curcas]
17 Hb_168418_010 0.3224605211 - - PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]
18 Hb_029162_020 0.327320894 - - -
19 Hb_048610_010 0.3307378514 - - -
20 Hb_001230_010 0.3318274432 - - -

Gene co-expression network

sample Hb_026766_010 Hb_026766_010 Hb_027751_030 Hb_027751_030 Hb_026766_010--Hb_027751_030 Hb_000284_160 Hb_000284_160 Hb_026766_010--Hb_000284_160 Hb_003992_120 Hb_003992_120 Hb_026766_010--Hb_003992_120 Hb_004584_010 Hb_004584_010 Hb_026766_010--Hb_004584_010 Hb_000614_330 Hb_000614_330 Hb_026766_010--Hb_000614_330 Hb_000603_240 Hb_000603_240 Hb_026766_010--Hb_000603_240 Hb_027751_040 Hb_027751_040 Hb_027751_030--Hb_027751_040 Hb_002843_190 Hb_002843_190 Hb_027751_030--Hb_002843_190 Hb_002094_020 Hb_002094_020 Hb_027751_030--Hb_002094_020 Hb_027751_030--Hb_000284_160 Hb_001230_010 Hb_001230_010 Hb_027751_030--Hb_001230_010 Hb_000284_160--Hb_000603_240 Hb_000284_160--Hb_027751_040 Hb_000284_160--Hb_000614_330 Hb_001993_020 Hb_001993_020 Hb_000284_160--Hb_001993_020 Hb_003992_120--Hb_002843_190 Hb_010812_090 Hb_010812_090 Hb_003992_120--Hb_010812_090 Hb_035905_010 Hb_035905_010 Hb_003992_120--Hb_035905_010 Hb_010128_110 Hb_010128_110 Hb_003992_120--Hb_010128_110 Hb_001141_400 Hb_001141_400 Hb_003992_120--Hb_001141_400 Hb_004584_010--Hb_003992_120 Hb_004584_010--Hb_000284_160 Hb_003335_070 Hb_003335_070 Hb_004584_010--Hb_003335_070 Hb_004584_010--Hb_000603_240 Hb_004584_010--Hb_027751_030 Hb_000614_330--Hb_027751_030 Hb_000614_330--Hb_002843_190 Hb_000614_330--Hb_027751_040 Hb_000538_150 Hb_000538_150 Hb_000614_330--Hb_000538_150 Hb_000603_240--Hb_027751_040 Hb_000603_240--Hb_027751_030 Hb_000603_240--Hb_003335_070 Hb_000603_240--Hb_002843_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.335512 0 0 0 0 0.0294975
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.153566 0.0603659 0 0 0

CAGE analysis